Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G319500.1 | Wheat | cytosol | 97.91 | 97.91 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 97.91 | 97.57 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 96.17 | 96.17 |
| Os09t0525300-01 | Rice | cytosol | 81.53 | 83.27 |
| Zm00001d021224_P001 | Maize | cytosol | 79.79 | 77.36 |
| EER99217 | Sorghum | cytosol | 79.79 | 76.59 |
| GSMUA_Achr7P05860_001 | Banana | cytosol | 64.46 | 63.79 |
| GSMUA_Achr3P12400_001 | Banana | cytosol | 63.07 | 62.85 |
| Zm00001d024256_P001 | Maize | cytosol, mitochondrion | 51.92 | 59.84 |
| CDY42484 | Canola | cytosol | 56.45 | 56.84 |
| VIT_15s0048g01930.t01 | Wine grape | cytosol | 57.14 | 56.75 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 58.88 | 56.71 |
| CDX89095 | Canola | cytosol | 56.45 | 56.64 |
| KRH03980 | Soybean | cytosol, plastid | 56.45 | 56.64 |
| Bra014456.1-P | Field mustard | cytosol | 56.45 | 56.64 |
| VIT_16s0100g00520.t01 | Wine grape | cytosol | 54.7 | 56.27 |
| AT3G61060.2 | Thale cress | cytosol | 56.79 | 56.01 |
| GSMUA_Achr11P... | Banana | cytosol | 35.19 | 55.8 |
| Zm00001d035636_P001 | Maize | plastid | 49.83 | 54.79 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 56.79 | 54.7 |
| Solyc10g017960.1.1 | Tomato | cytosol | 55.4 | 54.45 |
| Solyc08g080360.2.1 | Tomato | plastid | 54.7 | 54.33 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 57.49 | 54.28 |
| PGSC0003DMT400058590 | Potato | plastid | 54.36 | 53.98 |
| KRH65151 | Soybean | cytosol | 52.61 | 53.74 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 54.01 | 53.63 |
| KRH38594 | Soybean | cytosol | 54.01 | 53.63 |
| PGSC0003DMT400010881 | Potato | plastid | 53.66 | 53.29 |
| CDY57080 | Canola | cytosol | 52.26 | 53.19 |
| KRH48244 | Soybean | cytosol | 51.92 | 53.02 |
| KRH09123 | Soybean | cytosol | 53.31 | 52.94 |
| CDY16361 | Canola | extracellular | 35.19 | 52.6 |
| KRG91447 | Soybean | cytosol, plastid | 53.66 | 52.56 |
| PGSC0003DMT400026564 | Potato | cytosol | 54.01 | 52.54 |
| KRH35368 | Soybean | cytosol | 54.01 | 52.01 |
| Bra019781.1-P | Field mustard | cytosol | 51.92 | 51.92 |
| PGSC0003DMT400071397 | Potato | cytosol | 51.92 | 51.74 |
| CDX98047 | Canola | cytosol | 51.57 | 51.57 |
| Solyc01g091700.2.1 | Tomato | cytosol | 51.57 | 51.57 |
| Solyc03g026160.2.1 | Tomato | cytosol, extracellular | 27.18 | 51.32 |
| VIT_02s0025g04380.t01 | Wine grape | cytosol | 55.05 | 51.13 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 54.36 | 50.98 |
| CDY38901 | Canola | cytosol | 49.13 | 50.72 |
| CDY32595 | Canola | cytosol | 50.17 | 49.83 |
| CDY63226 | Canola | plastid | 50.17 | 49.66 |
| Bra027618.1-P | Field mustard | cytosol | 50.17 | 49.66 |
| CDY47354 | Canola | cytosol | 50.17 | 49.66 |
| CDY49201 | Canola | cytosol | 50.17 | 49.66 |
| AT5G52120.1 | Thale cress | cytosol | 50.17 | 49.48 |
| Bra027000.1-P | Field mustard | cytosol | 49.83 | 49.31 |
| CDY45973 | Canola | cytosol | 49.83 | 49.31 |
| Bra029137.1-P | Field mustard | cytosol | 49.83 | 49.31 |
| AT1G63090.1 | Thale cress | cytosol | 48.78 | 48.44 |
| KRH57251 | Soybean | plastid | 55.75 | 46.92 |
| PGSC0003DMT400037131 | Potato | cytosol | 48.08 | 46.62 |
| AT1G12710.2 | Thale cress | cytosol | 52.61 | 45.35 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 12.89 | 29.13 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 25.09 | 27.48 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 13.24 | 26.76 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 25.44 | 24.58 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 25.09 | 24.24 |
| TraesCS4A01G041300.1 | Wheat | plastid | 26.83 | 24.06 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 24.04 | 23.23 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 23.0 | 22.84 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 25.09 | 22.78 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 23.34 | 21.97 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 24.04 | 21.9 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 19.51 | 21.88 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 7.67 | 20.37 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 21.95 | 20.0 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 22.3 | 20.0 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 22.3 | 18.66 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 6.97 | 16.53 |
| TraesCS3A01G082500.1 | Wheat | plastid | 11.5 | 15.71 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G312700.1 | EnsemblPlantsGene:TraesCS5A01G312700 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF9 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SMART:SM00256 | SUPFAM:SSF81383 |
| MapMan:19.2.2.8.1.4.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:524047919..524049832
Molecular Weight (calculated)
31950.1 Da
IEP (calculated)
8.382
GRAVY (calculated)
-0.286
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAVGSSASR GGGTALGDLP ENCVAEVMLR LNPTEICGMA RLSRTFRAAA SGDAVWEAKL PRNYARLLAA AAGDEEAAAL EAEAIPKKEV YARLSRRNSL
101: DGGTKEFWLD KAGGGTCMTI YSRALSITGI DDRRYWNFIP NDESRFRSVA YLSQIWWFEV RGEVEFCFPE GTYSLFFRIH LGRPFKRLGR RVYSAEHIHG
201: WDVKPVRFQL STSDGQQAQS KCYLTDPGVW IYHHVGDFVV KDSNEPLNIQ FAMVQIDCTH TKGGLCMDSV VIKPKCLARK KGTGSYE
101: DGGTKEFWLD KAGGGTCMTI YSRALSITGI DDRRYWNFIP NDESRFRSVA YLSQIWWFEV RGEVEFCFPE GTYSLFFRIH LGRPFKRLGR RVYSAEHIHG
201: WDVKPVRFQL STSDGQQAQS KCYLTDPGVW IYHHVGDFVV KDSNEPLNIQ FAMVQIDCTH TKGGLCMDSV VIKPKCLARK KGTGSYE
001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
Arabidopsis Description
AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.