Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G018900.1 | Wheat | cytosol | 64.06 | 68.33 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 65.94 | 67.85 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 41.25 | 51.16 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 41.25 | 47.83 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 38.12 | 47.1 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 37.19 | 44.57 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 36.25 | 44.27 |
| Bra035198.1-P | Field mustard | cytosol | 32.81 | 41.02 |
| CDX87293 | Canola | cytosol | 32.81 | 41.02 |
| CDY39994 | Canola | cytosol | 32.81 | 41.02 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 16.25 | 40.94 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 36.25 | 40.14 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 37.19 | 40.07 |
| KRH33867 | Soybean | cytosol | 32.81 | 39.77 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 17.5 | 39.44 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 36.56 | 39.39 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 34.38 | 39.15 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 38.44 | 38.92 |
| AT1G80110.1 | Thale cress | cytosol | 31.25 | 38.91 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 34.38 | 38.6 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 35.31 | 38.05 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 30.31 | 37.89 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 35.94 | 37.7 |
| PGSC0003DMT400063740 | Potato | cytosol | 33.75 | 37.63 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 33.75 | 37.5 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 36.88 | 37.46 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 32.19 | 37.18 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.44 | 36.9 |
| TraesCS4A01G041300.1 | Wheat | plastid | 35.62 | 35.62 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 11.88 | 35.19 |
| PGSC0003DMT400063744 | Potato | cytosol | 30.94 | 35.11 |
| Solyc01g100010.2.1 | Tomato | cytosol | 30.31 | 34.89 |
| Solyc01g100000.2.1 | Tomato | cytosol | 29.06 | 34.32 |
| KRH68480 | Soybean | cytosol | 30.0 | 33.45 |
| KRG96762 | Soybean | cytosol | 29.69 | 33.1 |
| KRH68481 | Soybean | cytosol | 15.94 | 32.28 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 12.19 | 32.23 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 30.94 | 31.43 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 29.69 | 27.7 |
| TraesCS3A01G082500.1 | Wheat | plastid | 17.5 | 26.67 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 23.44 | 24.51 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 21.25 | 22.37 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 20.0 | 22.3 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 20.0 | 21.48 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 18.12 | 19.46 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G319200.1 | EnsemblPlantsGene:TraesCS4A01G319200 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SEG:seg |
| SUPFAM:SSF81383 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:608260037..608261317
Molecular Weight (calculated)
35237.8 Da
IEP (calculated)
6.048
GRAVY (calculated)
-0.296
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVERVKKLA REEEKAQSRI IQGIPEECLA KAIGLTSPAD ACRAAAVSTA FRSAADLDAV WTRFLPPDCD AVLERAVHLV DAPSKKELFM DLSNEHVVLD
101: DGKMSFGLER SNGAKCYMLS ASELVIEWMH ENLYWTRRTD PDSRFSKVAE LLSVCWLHIY GTINSRELTP ATHYAAYLVF KLTHDASGLS SPRQTSFVKV
201: GGGPCLQSCR PSSTSGGASS SLLVGSTHTV SLHPCNRASC TRNGAAAAEP HEHEQGGGVG GVVRYPRHRV DGWLELEMGD FHTDTDICGG DDVMMEVHEW
301: EELKWKKGLI IEGIEIRPRN
101: DGKMSFGLER SNGAKCYMLS ASELVIEWMH ENLYWTRRTD PDSRFSKVAE LLSVCWLHIY GTINSRELTP ATHYAAYLVF KLTHDASGLS SPRQTSFVKV
201: GGGPCLQSCR PSSTSGGASS SLLVGSTHTV SLHPCNRASC TRNGAAAAEP HEHEQGGGVG GVVRYPRHRV DGWLELEMGD FHTDTDICGG DDVMMEVHEW
301: EELKWKKGLI IEGIEIRPRN
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.