Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G369000.1 | Wheat | cytosol | 92.06 | 92.65 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 90.48 | 90.76 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 81.9 | 85.43 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 81.9 | 84.04 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 77.46 | 82.15 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 75.24 | 79.8 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 79.05 | 73.24 |
| Os02t0813350-01 | Rice | cytosol | 61.59 | 65.32 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 54.29 | 65.27 |
| EES05998 | Sorghum | cytosol | 57.46 | 65.11 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 26.03 | 64.57 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 60.0 | 62.58 |
| EES05996 | Sorghum | cytosol | 52.38 | 59.14 |
| Os02t0813166-00 | Rice | cytosol, plastid | 47.3 | 56.87 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 19.37 | 56.48 |
| OQU85929 | Sorghum | cytosol | 50.48 | 55.79 |
| TraesCS4A01G041300.1 | Wheat | plastid | 56.51 | 55.62 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 44.76 | 54.86 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 43.17 | 53.12 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 20.32 | 52.89 |
| Os02t0813083-00 | Rice | extracellular | 19.05 | 52.63 |
| AT1G80110.1 | Thale cress | cytosol | 35.24 | 43.19 |
| CDY39994 | Canola | cytosol | 34.92 | 42.97 |
| Bra035198.1-P | Field mustard | cytosol | 34.6 | 42.58 |
| CDX87293 | Canola | cytosol | 34.6 | 42.58 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 21.59 | 42.5 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 38.1 | 42.11 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 41.59 | 41.46 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 36.19 | 41.16 |
| KRH33867 | Soybean | cytosol | 33.65 | 40.15 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 36.83 | 40.14 |
| TraesCS3A01G082500.1 | Wheat | plastid | 26.67 | 40.0 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 36.51 | 39.93 |
| PGSC0003DMT400063740 | Potato | cytosol | 35.56 | 39.02 |
| Solyc01g099990.2.1 | Tomato | cytosol | 34.6 | 37.59 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 37.46 | 36.88 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 34.6 | 36.7 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 33.97 | 35.08 |
| KRH68481 | Soybean | cytosol | 17.46 | 34.81 |
| Solyc01g100000.2.1 | Tomato | cytosol | 29.84 | 34.69 |
| KRH68480 | Soybean | cytosol | 31.11 | 34.15 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.52 | 33.45 |
| KRG96762 | Soybean | cytosol | 30.48 | 33.45 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.84 | 33.33 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 14.92 | 33.1 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 29.21 | 29.21 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 28.89 | 26.53 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 21.9 | 24.04 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 21.9 | 22.7 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 20.95 | 21.57 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 20.32 | 21.48 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 19.05 | 20.13 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G383900.1 | EnsemblPlantsGene:TraesCS6A01G383900 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF2 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr6A:-:602715412..602717682
Molecular Weight (calculated)
35046.8 Da
IEP (calculated)
4.222
GRAVY (calculated)
-0.455
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQRTPAGR RTEEPMEGAC EIARLPEELL SAALARTTPR DACRAAAVSP AFRAAADSDA VWARFLPPGG LPPLADGELA GPAPPSSKKE LFLRLSAGPA
101: LLQDRLVSVW VDRETGAKCY MLSARNLFIV WGNTPEYWTW IPLEDSRFSE GAELVDVCWF EIHGKIHSNM LSQDTTYAAY MVFKMADYYY GLNFPAQEAS
201: VSSGATNLTR EVCLQAGEAD ENMHYDEGDD DEYEEEEEDV DEYYRSLTNR RVVYEENVAL PQRRADGWME LELGEFLNEG GDDGEVSISL TETKSGKWKS
301: GLIVQGIEIR CKKSG
101: LLQDRLVSVW VDRETGAKCY MLSARNLFIV WGNTPEYWTW IPLEDSRFSE GAELVDVCWF EIHGKIHSNM LSQDTTYAAY MVFKMADYYY GLNFPAQEAS
201: VSSGATNLTR EVCLQAGEAD ENMHYDEGDD DEYEEEEEDV DEYYRSLTNR RVVYEENVAL PQRRADGWME LELGEFLNEG GDDGEVSISL TETKSGKWKS
301: GLIVQGIEIR CKKSG
001: MTKTRCMHEH FRKIVQRVKK TLRLSASDKS HGVAELDDLP EECVSIIVSF TSPQDACVLA SVSKTFASAV KSDIVWEKFI PPEYESLISQ SRAFKFLSKK
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR
Arabidopsis Description
PP2B8Putative F-box protein PP2-B8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.