Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH19580 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G56250.1 | KRH19580 | AT5G44110.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96762 | Soybean | cytosol | 90.24 | 90.24 |
| KRH33867 | Soybean | cytosol | 60.63 | 65.91 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 58.88 | 59.3 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 57.14 | 56.94 |
| Solyc01g100010.2.1 | Tomato | cytosol | 50.52 | 52.16 |
| PGSC0003DMT400063744 | Potato | cytosol | 50.87 | 51.77 |
| Bra030758.1-P | Field mustard | cytosol | 46.69 | 49.26 |
| CDY72024 | Canola | plastid | 46.69 | 49.26 |
| CDY31110 | Canola | plastid | 45.99 | 48.89 |
| Bra018579.1-P | Field mustard | cytosol | 46.34 | 47.84 |
| CDY71953 | Canola | cytosol | 46.34 | 47.84 |
| Solyc01g100000.2.1 | Tomato | cytosol | 44.95 | 47.6 |
| AT1G56240.1 | Thale cress | cytosol | 46.34 | 46.83 |
| Bra038174.1-P | Field mustard | cytosol | 45.99 | 46.64 |
| AT1G09155.1 | Thale cress | cytosol | 46.69 | 46.37 |
| CDY54100 | Canola | cytosol | 45.64 | 46.29 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 41.46 | 46.12 |
| AT1G56250.1 | Thale cress | cytosol | 45.3 | 46.1 |
| CDX95006 | Canola | cytosol | 44.6 | 46.04 |
| CDY38992 | Canola | cytosol | 44.95 | 45.58 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 40.77 | 45.17 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 41.81 | 44.94 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 42.16 | 43.84 |
| KRH34201 | Soybean | nucleus | 39.37 | 42.97 |
| KRH68481 | Soybean | cytosol | 23.34 | 42.41 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 40.07 | 40.93 |
| KRH55670 | Soybean | cytosol | 13.94 | 40.82 |
| KRH15177 | Soybean | cytosol | 34.84 | 38.91 |
| KRG92588 | Soybean | cytosol | 35.89 | 38.72 |
| KRH55667 | Soybean | cytosol | 35.54 | 38.64 |
| KRG92586 | Soybean | cytosol, plastid | 40.77 | 38.61 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 34.84 | 37.88 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 34.84 | 37.74 |
| KRH55669 | Soybean | cytosol | 34.49 | 37.5 |
| EES05996 | Sorghum | cytosol | 35.89 | 36.92 |
| KRH68844 | Soybean | cytosol | 40.77 | 36.91 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 33.1 | 36.26 |
| GSMUA_Achr8P03670_001 | Banana | nucleus | 35.89 | 36.01 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 32.75 | 35.88 |
| KXG28410 | Sorghum | cytosol | 33.1 | 35.19 |
| OQU85929 | Sorghum | cytosol | 34.84 | 35.09 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 19.51 | 35.0 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 35.89 | 34.92 |
| KRH34196 | Soybean | cytosol | 36.24 | 34.9 |
| EES05998 | Sorghum | cytosol | 33.8 | 34.89 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 35.54 | 34.69 |
| CDY62670 | Canola | cytosol | 3.48 | 34.48 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 35.54 | 34.34 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 35.54 | 34.34 |
| GSMUA_Achr9P02770_001 | Banana | nucleus | 33.8 | 34.04 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 35.19 | 34.01 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 35.19 | 34.01 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 35.54 | 33.77 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 36.59 | 33.76 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 35.19 | 33.67 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 36.93 | 33.54 |
| Os02t0813166-00 | Rice | cytosol, plastid | 30.31 | 33.21 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 34.84 | 33.11 |
| Os02t0813350-01 | Rice | cytosol | 34.15 | 33.0 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 36.24 | 32.91 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 35.89 | 32.91 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 33.8 | 32.88 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 16.38 | 32.87 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 29.97 | 32.82 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 29.27 | 32.81 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 33.8 | 32.77 |
| KRH05841 | Soybean | cytosol, nucleus, peroxisome | 24.39 | 32.71 |
| Os02t0813000-00 | Rice | cytosol | 26.13 | 32.61 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 34.84 | 32.57 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 33.8 | 32.55 |
| Os02t0813083-00 | Rice | extracellular | 12.89 | 32.46 |
| Os04t0280500-00 | Rice | cytosol | 17.07 | 32.45 |
| Os12t0131400-01 | Rice | nucleus | 34.15 | 32.45 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 16.03 | 32.39 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 35.89 | 32.39 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 35.54 | 32.18 |
| KRG92590 | Soybean | cytosol | 31.36 | 31.8 |
| EES05994 | Sorghum | cytosol | 37.28 | 31.66 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 34.49 | 31.63 |
| Zm00001d051936_P001 | Maize | cytosol | 34.49 | 31.63 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 31.71 | 31.6 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 32.75 | 31.54 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 34.49 | 31.53 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 31.71 | 31.49 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 11.85 | 31.48 |
| Os02t0812500-01 | Rice | cytosol | 36.24 | 31.33 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 33.45 | 31.27 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 34.15 | 31.11 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 29.62 | 31.02 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 32.06 | 30.98 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 32.06 | 30.98 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 31.71 | 30.95 |
| TraesCS4A01G041300.1 | Wheat | plastid | 34.49 | 30.94 |
| KXG31332 | Sorghum | cytosol | 32.75 | 30.82 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 32.4 | 30.79 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 36.24 | 30.77 |
| Os08t0150700-01 | Rice | cytosol | 32.06 | 30.77 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 32.75 | 30.72 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 31.71 | 30.64 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 36.24 | 30.59 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 32.4 | 30.49 |
| Zm00001d053172_P001 | Maize | cytosol | 31.36 | 30.41 |
| TraesCSU01G190600.1 | Wheat | cytosol, mitochondrion | 33.8 | 30.31 |
| TraesCSU01G197600.1 | Wheat | cytosol, mitochondrion | 33.8 | 30.31 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 32.75 | 30.13 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 33.45 | 30.0 |
| KXG31333 | Sorghum | cytosol | 31.71 | 29.93 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 34.84 | 29.76 |
| Zm00001d024621_P001 | Maize | cytosol | 31.71 | 29.64 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 32.4 | 29.62 |
| Zm00001d032787_P001 | Maize | cytosol | 30.31 | 29.59 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 26.13 | 29.18 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 29.97 | 28.67 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 32.4 | 28.62 |
| Zm00001d018451_P001 | Maize | cytosol | 33.8 | 28.2 |
| TraesCS3A01G082500.1 | Wheat | plastid | 20.21 | 27.62 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 29.62 | 27.51 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 16.38 | 27.49 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 25.78 | 26.71 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.87 | 25.97 |
| Os12t0129700-01 | Rice | cytosol | 33.45 | 25.74 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 25.78 | 25.69 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.53 | 25.65 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 26.83 | 25.41 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 27.87 | 25.4 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 27.87 | 25.16 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 27.53 | 25.08 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 20.21 | 24.07 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 28.57 | 23.91 |
| OQU92610 | Sorghum | mitochondrion | 30.66 | 23.59 |
| KRH48244 | Soybean | cytosol | 22.3 | 22.78 |
| KRH03980 | Soybean | cytosol, plastid | 22.3 | 22.38 |
| Os02t0812600-00 | Rice | extracellular | 35.54 | 22.37 |
| KRH65151 | Soybean | cytosol | 21.25 | 21.71 |
| KRH20009 | Soybean | cytosol, plastid | 21.95 | 21.14 |
| KRH32630 | Soybean | cytosol, plastid | 21.95 | 21.0 |
| KRG91447 | Soybean | cytosol, plastid | 21.25 | 20.82 |
| KRH35368 | Soybean | cytosol | 21.25 | 20.47 |
| KRH09123 | Soybean | cytosol | 20.56 | 20.42 |
| KRH38594 | Soybean | cytosol | 20.56 | 20.42 |
| KRH67813 | Soybean | cytosol | 20.91 | 20.34 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 21.25 | 18.89 |
| KRH57251 | Soybean | plastid | 21.95 | 18.48 |
| OQU85932 | Sorghum | mitochondrion | 31.36 | 16.04 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 28.22 | 14.46 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100801852 | MapMan:35.1 | EMBL:ACUP02002118 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_03G233800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1JR81 | InterPro:IPR001810 |
| EnsemblPlants:KRH68480 | ProteinID:KRH68480 | ProteinID:KRH68480.1 | PFAM:PF00646 | PFAM:PF14299 | InterPro:PP2-like |
| PFscan:PS50181 | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF15 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI000296404B |
Description
hypothetical protein
Coordinates
chr3:+:43456187..43457585
Molecular Weight (calculated)
32333.6 Da
IEP (calculated)
6.625
GRAVY (calculated)
-0.303
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHMASSCSF NIESLPHDCV SEILSHTSPL EACMVSLVSP TLRSCANSDT VWRSFLPSDY EDIVSSAVNP FILSFSSYKQ LFHALCHPLL IDQGNKSFKL
101: EKSSGKKSYI ISARELSIAW SSDPMMWSWK PIPESRFPEA AELRTVSWLE IEGKIRTRIL TPNTSYSAYL IMNVSHRAYG LDFAPSEVSV TVGKNVRRGK
201: AYLGHKDENK RKMETLFYGN RTEVLRNAAF DEGIASPSKR EDGWMEIELG EFFNGEGDEE IKMCLREVGY QLKGGLVLEG IQLRPKP
101: EKSSGKKSYI ISARELSIAW SSDPMMWSWK PIPESRFPEA AELRTVSWLE IEGKIRTRIL TPNTSYSAYL IMNVSHRAYG LDFAPSEVSV TVGKNVRRGK
201: AYLGHKDENK RKMETLFYGN RTEVLRNAAF DEGIASPSKR EDGWMEIELG EFFNGEGDEE IKMCLREVGY QLKGGLVLEG IQLRPKP
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.