CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05841	Soybean	cytosol, nucleus, peroxisome	65.37	78.5
KRG92588	Soybean	cytosol	72.37	69.92
KRH34201	Soybean	nucleus	61.87	60.46
KRH34196	Soybean	cytosol	69.26	59.73
KRG92590	Soybean	cytosol	54.86	49.82
KRG92586	Soybean	cytosol, plastid	50.58	42.9
KRH68844	Soybean	cytosol	49.03	39.75
KRH33867	Soybean	cytosol	40.08	39.02
KRH55670	Soybean	cytosol	14.79	38.78
KRH55667	Soybean	cytosol	39.3	38.26
KRH55669	Soybean	cytosol	37.74	36.74
KRH68480	Soybean	cytosol	38.91	34.84
KRH68481	Soybean	cytosol	21.4	34.81
KRG96762	Soybean	cytosol	38.52	34.49
KRH20009	Soybean	cytosol, plastid	29.18	25.17
KRH32630	Soybean	cytosol, plastid	28.79	24.67
KRH03980	Soybean	cytosol, plastid	26.85	24.13
KRH48244	Soybean	cytosol	25.68	23.49
KRH67813	Soybean	cytosol	26.85	23.39
KRH65151	Soybean	cytosol	24.9	22.78
KRG91447	Soybean	cytosol, plastid	25.29	22.18
KRH35368	Soybean	cytosol	24.9	21.48
KRH09123	Soybean	cytosol	24.12	21.45
KRH38594	Soybean	cytosol	23.35	20.76
KRH57251	Soybean	plastid	26.46	19.94

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	UniProt:A0A0R0GJJ1	EMBL:ACUP02008569	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_14G073300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	EnsemblPlants:KRH15177
ProteinID:KRH15177	ProteinID:KRH15177.1	PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181
PANTHER:PTHR32278	PANTHER:PTHR32278:SF6	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000189D89E	SEG:seg

Description

hypothetical protein

Coordinates

chr14:+:6158677..6160640

Molecular Weight (calculated)

29146.1 Da

IEP (calculated)

6.981

GRAVY (calculated)

-0.132

Length

257 amino acids

Sequence
(BLAST)

001: MELQDLPEGC IAKILSYTTP VDVCRLSLVS KAFRSAAESD TVWDCFLLSD FTSIIPISST SKKDLYFTLS DHPTIIHQGR KSVQLDKRTG KKCCMLSARN
101: LTIIWGDTVQ HWEWTSLPES RFQEVAMLQA VCWFDISGSI NTLTLSSNTH YATFLVFKMI NASGFHYHPT VLSVGVLGGN SNTKYVCLDP NLKGNHRLQE
201: LQFPKVRSDG WLEIEMGEFF NSGQEEKQVQ MKVMETTSHI WKCGFILEGI EIRPKHV

Best Arabidopsis Sequence Match ( AT2G02360.1 )
(BLAST)

001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL

Arabidopsis Description

PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.