CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92588	Soybean	cytosol	63.76	71.43
KRH15177	Soybean	cytosol	59.73	69.26
KRH05841	Soybean	cytosol, nucleus, peroxisome	42.95	59.81
KRH34201	Soybean	nucleus	52.01	58.94
KRG92590	Soybean	cytosol	43.62	45.94
KRH33867	Soybean	cytosol	34.9	39.39
KRG92586	Soybean	cytosol, plastid	39.26	38.61
KRH68481	Soybean	cytosol	20.47	38.61
KRH68844	Soybean	cytosol	38.93	36.59
KRG96762	Soybean	cytosol	35.23	36.59
KRH68480	Soybean	cytosol	34.9	36.24
KRH55667	Soybean	cytosol	31.88	35.98
KRH55670	Soybean	cytosol	11.41	34.69
KRH55669	Soybean	cytosol	30.2	34.09
KRH32630	Soybean	cytosol, plastid	23.83	23.67
KRH20009	Soybean	cytosol, plastid	23.49	23.49
KRH48244	Soybean	cytosol	21.48	22.78
KRH67813	Soybean	cytosol	22.48	22.71
KRH65151	Soybean	cytosol	21.14	22.42
KRH03980	Soybean	cytosol, plastid	21.14	22.03
KRH09123	Soybean	cytosol	20.13	20.76
KRG91447	Soybean	cytosol, plastid	20.13	20.48
KRH38594	Soybean	cytosol	19.8	20.42
KRH35368	Soybean	cytosol	20.13	20.13
KRH57251	Soybean	plastid	21.81	19.06

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100799869	MapMan:35.1	EMBL:ACUP02006583	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_10G169300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LBU4	InterPro:IPR001810
EnsemblPlants:KRH34196	ProteinID:KRH34196	ProteinID:KRH34196.1	PFAM:PF12937	PFAM:PF14299	InterPro:PP2-like
PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF6	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI00023CE65F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:40354794..40356358

Molecular Weight (calculated)

34291.9 Da

IEP (calculated)

6.253

GRAVY (calculated)

-0.263

Length

298 amino acids

Sequence
(BLAST)

001: MKSQDLPEGC VAHILSYICT PEDIVRLSLV SKAFYSAADY DTVWDRFIPS DFSSTISPLS SSNSKKDLYF TLSDRPTIID QGRKVRTLFL LACSDVFYGI
101: PEMKCVVYVA SLKFLQSFQL EKRTAKKCYM LSARDISITW APTQGEASQY WEWKSLPESR FQEVARLYAV CWFNITGQIK TRVLSPNTQY AAFLVFQMID
201: ASGFHHHPAM LSVSNVGGSR TSKYVCLDPN LEDNDLDDRF RGLQRPNVRK DKWLEIEMGE FFNSGLEEDE IYMNVRETSD MWKHGFILEG IEVRPKHV

Best Arabidopsis Sequence Match ( AT1G80110.1 )
(BLAST)

001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP

Arabidopsis Description

PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.