CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03980	Soybean	cytosol, plastid	81.23	96.85
HORVU1Hr1G048690.1	Barley	peroxisome	33.43	67.06
CDY16361	Canola	extracellular	37.54	66.67
CDY57080	Canola	cytosol	54.55	65.96
Bra019781.1-P	Field mustard	cytosol	55.13	65.51
CDX98047	Canola	cytosol	54.84	65.16
PGSC0003DMT400058590	Potato	plastid	54.25	64.01
Solyc08g080360.2.1	Tomato	plastid	54.25	64.01
Bra027000.1-P	Field mustard	cytosol	53.67	63.1
Solyc12g056410.1.1	Tomato	cytosol, plastid	53.08	62.63
CDY45973	Canola	cytosol	53.08	62.41
CDY63226	Canola	plastid	53.08	62.41
PGSC0003DMT400010881	Potato	plastid	52.79	62.28
CDY47354	Canola	cytosol	52.49	61.72
Bra027618.1-P	Field mustard	cytosol	52.2	61.38
CDY49201	Canola	cytosol	52.2	61.38
VIT_02s0025g04380.t01	Wine grape	cytosol	55.13	60.84
HORVU2Hr1G094960.4	Barley	cytosol	35.19	60.61
AT1G63090.1	Thale cress	cytosol	51.32	60.55
GSMUA_Achr4P27200_001	Banana	cytosol	50.15	59.58
KRH48244	Soybean	cytosol	48.97	59.43
KRH65151	Soybean	cytosol	48.97	59.43
GSMUA_Achr5P03300_001	Banana	cytosol	49.85	58.42
GSMUA_Achr11P...	Banana	cytosol	48.97	58.39
Os09t0525300-01	Rice	cytosol	47.21	57.3
GSMUA_Achr1P03900_001	Banana	cytosol	48.68	56.85
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	49.85	56.67
TraesCS5D01G319500.1	Wheat	cytosol	47.51	56.45
Zm00001d029673_P001	Maize	plasma membrane	48.97	56.42
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	49.56	56.33
HORVU1Hr1G048700.4	Barley	cytosol, nucleus, plasma membrane	49.85	56.29
TraesCS5B01G313700.1	Wheat	cytosol	47.51	56.25
EER94629	Sorghum	plasma membrane	49.56	56.15
AT1G12710.2	Thale cress	cytosol	54.55	55.86
GSMUA_Achr4P24870_001	Banana	cytosol	49.56	55.78
TraesCS5A01G312700.1	Wheat	cytosol	46.92	55.75
TraesCS1A01G188700.1	Wheat	plasma membrane	49.56	55.59
KRG91447	Soybean	cytosol, plastid	47.51	55.29
GSMUA_Achr7P05860_001	Banana	cytosol	46.92	55.17
Zm00001d021224_P001	Maize	cytosol	47.8	55.07
HORVU5Hr1G080530.1	Barley	cytosol	46.33	55.05
KRH35368	Soybean	cytosol	47.8	54.7
Os03t0116700-01	Rice	cytosol, extracellular	47.51	54.55
GSMUA_Achr3P12400_001	Banana	cytosol	46.04	54.51
KRH38594	Soybean	cytosol	45.75	53.98
KRH09123	Soybean	cytosol	45.75	53.98
KRH67813	Soybean	cytosol	46.33	53.56
EER99217	Sorghum	cytosol	46.92	53.51
TraesCS2D01G397700.1	Wheat	cytosol	46.63	53.36
TraesCS2A01G400100.1	Wheat	cytosol	46.63	53.36
EER95641	Sorghum	cytosol	45.75	53.06
Zm00001d027361_P001	Maize	cytosol	46.33	53.02
TraesCS6D01G237300.1	Wheat	cytosol	46.33	53.02
TraesCS6B01G269300.1	Wheat	cytosol	46.33	53.02
TraesCS6A01G256100.1	Wheat	cytosol	46.33	53.02
KRH20009	Soybean	cytosol, plastid	46.04	52.68
KRH32630	Soybean	cytosol, plastid	46.33	52.67
KXG31015	Sorghum	cytosol	46.33	52.49
Os02t0675800-01	Rice	cytosol	45.16	51.85
TraesCS2B01G418200.2	Wheat	cytosol	46.04	51.82
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	46.04	51.64
TraesCS4B01G356300.1	Wheat	cytosol	46.04	51.14
Zm00001d051447_P002	Maize	cytosol	44.28	51.01
TraesCS5A01G525700.1	Wheat	cytosol	45.45	50.65
TraesCS4D01G350000.1	Wheat	cytosol	45.45	50.49
GSMUA_Achr11P...	Banana	cytosol	26.39	49.72
EES11284	Sorghum	cytosol	44.57	48.56
Zm00001d026078_P001	Maize	cytosol	38.42	45.33
Zm00001d024256_P001	Maize	cytosol, mitochondrion	32.84	44.98
Os10t0522400-01	Rice	cytosol	21.41	44.24
HORVU4Hr1G086110.1	Barley	cytosol	19.65	44.08
Zm00001d035636_P001	Maize	plastid	31.09	40.61
Zm00001d021854_P001	Maize	cytosol	9.97	38.64
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	24.93	35.87
HORVU2Hr1G049730.1	Barley	cytosol	16.72	33.53
HORVU5Hr1G055050.1	Barley	mitochondrion	16.42	32.94
KRH55667	Soybean	cytosol	22.29	28.79
KRH55669	Soybean	cytosol	21.11	27.27
KRH15177	Soybean	cytosol	19.94	26.46
KRH55670	Soybean	cytosol	7.33	25.51
KRH34201	Soybean	nucleus	19.65	25.48
KRH33867	Soybean	cytosol	19.35	25.0
KRH68481	Soybean	cytosol	11.44	24.68
KRG92588	Soybean	cytosol	19.06	24.44
KRH05841	Soybean	cytosol, nucleus, peroxisome	15.25	24.3
KRG92586	Soybean	cytosol, plastid	20.82	23.43
KRG96762	Soybean	cytosol	19.06	22.65
KRH68844	Soybean	cytosol	20.82	22.4
KRH68480	Soybean	cytosol	18.48	21.95
KRH34196	Soybean	cytosol	19.06	21.81
KRG92590	Soybean	cytosol	17.6	21.2

Protein Annotations

EMBL:ACUP02002822	EnsemblPlants:KRH57251	EnsemblPlantsGene:GLYMA_05G049400	EntrezGene:100788842	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960
PANTHER:PTHR31960:SF2	PFAM:PF14299	PFscan:PS50181	ProteinID:KRH57251	ProteinID:KRH57251.1	SEG:seg
SUPFAM:SSF81383	UniParc:UPI000296CBEA	UniProt:I1K0D1	MapMan:19.2.2.8.1.4.6	:	:

Description

hypothetical protein

Coordinates

chr5:+:4412561..4415542

Molecular Weight (calculated)

38800.5 Da

IEP (calculated)

9.941

GRAVY (calculated)

-0.274

Length

341 amino acids

Sequence
(BLAST)

001: MRVHSVKSKS DTAVWRKQRK AQNQVPLLTY KLTTFSFRHI KSTIISHFHF NVTLMGLRFS SSEAAASESA SPSSSLGELP ESCVAQIMTY MDPPQICKLA
101: TLNRAFRGAS SADFVWESKL PPNYDILLRR IFADFPSHLG KRGIYARLCR LNSLDDGTKK VWLDRGMGKL CLCVSAKGLS ITGIDDRRYW NHIPTDESRF
201: SSVAYLQQIW WFQVDGEVEF PFPAGKYSVF FRIHLGRAGK RFGRRVCNTE HVHGWDKKPV RFQLWTSDGQ YVASQCFLNG PGKWIFYHAG DFVVEDGNAS
301: TKVKFSMTQI DCTHTKGGLC LDSVLVYPSE FRKVKAFLNY S

Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)

001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F

Arabidopsis Description

AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.