Factsheet for Zm00001d035636_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024256_P001	Maize	cytosol, mitochondrion	77.78	81.53
Zm00001d021224_P001	Maize	cytosol	67.82	59.8
EER99217	Sorghum	cytosol	66.28	57.86
GSMUA_Achr11P...	Banana	cytosol	36.78	53.04
TraesCS5D01G319500.1	Wheat	cytosol	55.56	50.52
TraesCS5A01G312700.1	Wheat	cytosol	54.79	49.83
HORVU5Hr1G080530.1	Barley	cytosol	54.79	49.83
TraesCS5B01G313700.1	Wheat	cytosol	54.79	49.65
Os09t0525300-01	Rice	cytosol	53.26	49.47
Zm00001d021854_P001	Maize	cytosol	15.71	46.59
GSMUA_Achr7P05860_001	Banana	cytosol	43.3	38.97
GSMUA_Achr3P12400_001	Banana	cytosol	42.15	38.19
VIT_15s0048g01930.t01	Wine grape	cytosol	41.0	37.02
CDX89095	Canola	cytosol	40.23	36.71
CDY42484	Canola	cytosol	39.85	36.49
Zm00001d029673_P001	Maize	plasma membrane	41.38	36.49
Zm00001d051447_P002	Maize	cytosol	41.38	36.49
Bra014456.1-P	Field mustard	cytosol	39.85	36.36
VIT_16s0100g00520.t01	Wine grape	cytosol	38.7	36.2
KRH03980	Soybean	cytosol, plastid	39.46	36.01
AT3G61060.2	Thale cress	cytosol	39.85	35.74
KRH65151	Soybean	cytosol	37.93	35.23
KRH48244	Soybean	cytosol	37.55	34.88
CDY57080	Canola	cytosol	37.16	34.4
Zm00001d027361_P001	Maize	cytosol	39.08	34.23
Solyc08g080360.2.1	Tomato	plastid	37.55	33.91
Solyc12g056410.1.1	Tomato	cytosol, plastid	37.55	33.91
PGSC0003DMT400058590	Potato	plastid	37.16	33.56
Bra019781.1-P	Field mustard	cytosol	36.78	33.45
CDX98047	Canola	cytosol	36.78	33.45
Bra027618.1-P	Field mustard	cytosol	37.16	33.45
CDY49201	Canola	cytosol	37.16	33.45
CDY47354	Canola	cytosol	37.16	33.45
PGSC0003DMT400071397	Potato	cytosol	36.78	33.33
PGSC0003DMT400010881	Potato	plastid	36.78	33.22
Bra027000.1-P	Field mustard	cytosol	36.78	33.1
CDY45973	Canola	cytosol	36.78	33.1
Solyc01g091700.2.1	Tomato	cytosol	36.4	33.1
CDY63226	Canola	plastid	36.4	32.76
VIT_02s0025g04380.t01	Wine grape	cytosol	38.7	32.69
Solyc10g017960.1.1	Tomato	cytosol	36.02	32.19
AT1G63090.1	Thale cress	cytosol	34.87	31.49
KRH38594	Soybean	cytosol	34.87	31.49
KRH09123	Soybean	cytosol	34.87	31.49
PGSC0003DMT400026564	Potato	cytosol	35.25	31.19
Zm00001d026078_P001	Maize	cytosol	34.48	31.14
KRH57251	Soybean	plastid	40.61	31.09
KRG91447	Soybean	cytosol, plastid	34.87	31.06
KRH35368	Soybean	cytosol	34.87	30.54
PGSC0003DMT400037131	Potato	cytosol	33.72	29.73
CDY38901	Canola	cytosol	31.42	29.5
AT1G12710.2	Thale cress	cytosol	37.55	29.43
CDY32595	Canola	cytosol	32.18	29.07
AT5G52120.1	Thale cress	cytosol	31.8	28.52
Bra029137.1-P	Field mustard	cytosol	31.42	28.28
CDY16361	Canola	extracellular	20.69	28.12
Solyc03g026160.2.1	Tomato	cytosol, extracellular	10.34	17.76
Zm00001d024621_P001	Maize	cytosol	20.31	17.26
Zm00001d018452_P001	Maize	cytosol, extracellular	19.92	17.22
Zm00001d032787_P001	Maize	cytosol	18.39	16.33
Zm00001d051936_P001	Maize	cytosol	18.77	15.65
Zm00001d053172_P001	Maize	cytosol	16.86	14.86
Zm00001d018451_P001	Maize	cytosol	18.01	13.66

Protein Annotations

EnsemblPlants:Zm00001d035636_P001	EnsemblPlants:Zm00001d035636_T001	EnsemblPlantsGene:Zm00001d035636	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF9	PFAM:PF14299	ProteinID:AQK79384.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI000842400C	UniProt:A0A1D6LHN5	MapMan:35.1	:

Description

F-box protein PP2-A13

Coordinates

chr6:+:37916341..37917723

Molecular Weight (calculated)

29497.1 Da

IEP (calculated)

10.060

GRAVY (calculated)

-0.529

Length

261 amino acids

Sequence
(BLAST)

001: MRGVLPQEIS AAISPLRPAA ATSRNLGRDS AYPSRRRHNR PQPRERDPQI ERPSPIDFCA PRARGGDGTV LSDLLENCVA EVLLRLDPLE ICRMARLSRM
101: FRGAASGDGV WESKLLTNYA RLLAVAAAGD GEAGQAVGSA PKAEPLPKKE LYARLCRRNR FDDGKKEFWL DKGGGGLCMS ISSRALSITG IDDRRYWNFI
201: PSDESRFRTV AYLSQIWWFE VRGEVEFFFP ESTYSLFYRI HLGRPFKRNQ RSSGRDHQVA Y

Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)

001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F

Arabidopsis Description

AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.