Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G371000.1 | Wheat | cytosol | 57.33 | 60.9 |
| Zm00001d032787_P001 | Maize | cytosol | 58.31 | 60.88 |
| Os08t0150700-01 | Rice | cytosol | 58.63 | 60.2 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 57.33 | 59.26 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 58.63 | 59.02 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 55.05 | 58.68 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 56.68 | 58.39 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 56.35 | 58.25 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 55.7 | 58.16 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 55.7 | 57.58 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 57.98 | 57.05 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 56.35 | 56.54 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 54.72 | 51.69 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 36.48 | 43.41 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 35.5 | 42.08 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 35.18 | 39.13 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 33.88 | 38.95 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 36.16 | 36.76 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 32.9 | 35.94 |
| Bra035198.1-P | Field mustard | cytosol | 28.99 | 34.77 |
| CDX87293 | Canola | cytosol | 28.99 | 34.77 |
| CDY39994 | Canola | cytosol | 28.99 | 34.77 |
| KRH33867 | Soybean | cytosol | 29.64 | 34.47 |
| AT1G80110.1 | Thale cress | cytosol | 28.66 | 34.24 |
| Zm00001d051936_P001 | Maize | cytosol | 34.85 | 34.19 |
| Zm00001d053172_P001 | Maize | cytosol | 32.9 | 34.12 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 31.6 | 34.04 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 30.62 | 33.94 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 31.6 | 33.68 |
| KRG96762 | Soybean | cytosol | 30.29 | 32.4 |
| Zm00001d018451_P001 | Maize | cytosol | 36.16 | 32.27 |
| KRH68480 | Soybean | cytosol | 29.64 | 31.71 |
| PGSC0003DMT400063740 | Potato | cytosol | 29.32 | 31.36 |
| Solyc01g099990.2.1 | Tomato | cytosol | 29.32 | 31.03 |
| PGSC0003DMT400063744 | Potato | cytosol | 28.34 | 30.85 |
| Solyc01g100010.2.1 | Tomato | cytosol | 27.69 | 30.58 |
| Solyc01g100000.2.1 | Tomato | cytosol | 26.06 | 29.52 |
| KRH68481 | Soybean | cytosol | 14.66 | 28.48 |
| Zm00001d021224_P001 | Maize | cytosol | 21.5 | 22.3 |
| Zm00001d029673_P001 | Maize | plasma membrane | 21.5 | 22.3 |
| Zm00001d027361_P001 | Maize | cytosol | 21.5 | 22.15 |
| Zm00001d024256_P001 | Maize | cytosol, mitochondrion | 17.59 | 21.69 |
| Zm00001d021854_P001 | Maize | cytosol | 6.19 | 21.59 |
| Zm00001d035636_P001 | Maize | plastid | 17.26 | 20.31 |
| Zm00001d051447_P002 | Maize | cytosol | 18.57 | 19.26 |
| Zm00001d026078_P001 | Maize | cytosol | 15.96 | 16.95 |
Protein Annotations
| EnsemblPlants:Zm00001d024621_P001 | EnsemblPlants:Zm00001d024621_T001 | EnsemblPlantsGene:Zm00001d024621 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0030246 | InterPro:F-box-like_dom_sf | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF14299 | ProteinID:AQK41632.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0002214DFF | UniProt:K7U0V3 |
| MapMan:35.1 | : | : | : | : | : |
Description
Phloem-specific lectin
Coordinates
chr10:+:80562832..80565140
Molecular Weight (calculated)
32940.7 Da
IEP (calculated)
5.255
GRAVY (calculated)
-0.191
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAAVARTT SETQVGDLPE VCLAQAIART SPRDACRCAA VSPAFRAAAD SDQVWRAFLP EQLEAAEDHL DSRRVSPPSQ AAHPAATVRG LSKKDAYLSL
101: CDAAGAVAVD GSGCRVWLER ASGATCYALS ARRLSLPWDD GEFSWRFTHH PRSRFAEVAE LVDCTCLDIY GSLPLAALTP ATVYAAFLVY GTAPEGAYRG
201: LSYPDQETAV AVGGRVVARH AVCLRPDDAE ARKFRGRGAG EEARRPSLRA DGWEEMEMGR LRTPPVESGG GGGDVCVVQA SFEVLGWYPK RGLVVEGIEF
301: RALHDAS
101: CDAAGAVAVD GSGCRVWLER ASGATCYALS ARRLSLPWDD GEFSWRFTHH PRSRFAEVAE LVDCTCLDIY GSLPLAALTP ATVYAAFLVY GTAPEGAYRG
201: LSYPDQETAV AVGGRVVARH AVCLRPDDAE ARKFRGRGAG EEARRPSLRA DGWEEMEMGR LRTPPVESGG GGGDVCVVQA SFEVLGWYPK RGLVVEGIEF
301: RALHDAS
001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
Arabidopsis Description
PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.