Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G079300.1 | Wheat | cytosol | 89.54 | 89.84 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 85.62 | 88.22 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 84.97 | 83.33 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 78.1 | 80.47 |
| Os08t0150700-01 | Rice | cytosol | 62.75 | 64.21 |
| Zm00001d024621_P001 | Maize | cytosol | 56.54 | 56.35 |
| Zm00001d032787_P001 | Maize | cytosol | 52.61 | 54.76 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 36.93 | 43.8 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 36.27 | 42.86 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 37.58 | 41.67 |
| OQU92610 | Sorghum | mitochondrion | 49.02 | 40.21 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 38.56 | 39.73 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 34.64 | 39.7 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 37.58 | 39.12 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 33.01 | 38.26 |
| KRH33867 | Soybean | cytosol | 32.35 | 37.5 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 36.6 | 37.33 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 34.64 | 37.19 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 34.97 | 37.15 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 36.6 | 37.09 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 37.91 | 36.71 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 35.95 | 36.42 |
| Bra035198.1-P | Field mustard | cytosol | 30.39 | 36.33 |
| CDX87293 | Canola | cytosol | 30.39 | 36.33 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 33.33 | 36.3 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 36.93 | 35.99 |
| CDY39994 | Canola | cytosol | 30.07 | 35.94 |
| AT1G80110.1 | Thale cress | cytosol | 30.07 | 35.8 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 31.7 | 35.4 |
| PGSC0003DMT400063740 | Potato | cytosol | 33.01 | 35.19 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 35.95 | 35.14 |
| Solyc01g100000.2.1 | Tomato | cytosol | 31.05 | 35.06 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.7 | 35.02 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 33.33 | 34.46 |
| Solyc01g099990.2.1 | Tomato | cytosol | 32.35 | 34.14 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 34.97 | 34.08 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 33.66 | 33.44 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 32.35 | 33.22 |
| KRH68480 | Soybean | cytosol | 30.72 | 32.75 |
| KRG96762 | Soybean | cytosol | 30.39 | 32.4 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.09 | 31.56 |
| Solyc01g100010.2.1 | Tomato | cytosol | 28.43 | 31.3 |
| KRH68481 | Soybean | cytosol | 16.01 | 31.01 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 30.07 | 29.21 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 24.51 | 27.08 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 20.26 | 25.73 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 23.53 | 24.0 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 23.53 | 23.45 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 21.9 | 23.26 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 20.59 | 21.14 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 20.59 | 20.79 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G094500.1 | EnsemblPlantsGene:TraesCS3B01G094500 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | SEG:seg | SMART:SM00256 | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3B:+:63387485..63389998
Molecular Weight (calculated)
32684.9 Da
IEP (calculated)
6.247
GRAVY (calculated)
0.003
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLGAGMAM ATAATEEDTT RLCDLPEACV AHVLALTSPR DACRCAAVSP CFRDAAESDV VWARFLPPDY RAILQLHEAP ARRFPLSRSG STAGAVSAAS
101: SKKEAFLGLT DAAVLADGGS MAVWLARGSG AKCVALSARR LSLPWEDGEL SWTWTPHPLS RFTDVAQLVE CTCLDIYGRL PTAALTPATA YAVYLVFATT
201: DAHRGLSFPD QETTVSVGGS APSRYTVCLR PDTAEARKFR GGKGTNGGVN VKGPVLRGDG WWEMEMGRLR TGNEAVAAEE VAVSFEMLGW YHKHGLVVEG
301: VEFRPL
101: SKKEAFLGLT DAAVLADGGS MAVWLARGSG AKCVALSARR LSLPWEDGEL SWTWTPHPLS RFTDVAQLVE CTCLDIYGRL PTAALTPATA YAVYLVFATT
201: DAHRGLSFPD QETTVSVGGS APSRYTVCLR PDTAEARKFR GGKGTNGGVN VKGPVLRGDG WWEMEMGRLR TGNEAVAAEE VAVSFEMLGW YHKHGLVVEG
301: VEFRPL
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.