Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G300300.1 | Wheat | cytosol | 94.61 | 94.3 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 92.59 | 92.59 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 89.23 | 90.14 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 80.47 | 78.1 |
| Os08t0150700-01 | Rice | cytosol | 64.31 | 63.88 |
| Zm00001d032787_P001 | Maize | cytosol | 55.89 | 56.46 |
| Zm00001d024621_P001 | Maize | cytosol | 58.25 | 56.35 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 38.05 | 43.63 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 37.37 | 43.02 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 38.72 | 41.67 |
| OQU92610 | Sorghum | mitochondrion | 52.19 | 41.55 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 35.35 | 39.33 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 34.68 | 39.02 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 38.72 | 38.72 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 37.04 | 37.41 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 36.03 | 37.15 |
| Bra035198.1-P | Field mustard | cytosol | 31.99 | 37.11 |
| CDX87293 | Canola | cytosol | 31.99 | 37.11 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 39.39 | 37.03 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 35.02 | 37.01 |
| CDY39994 | Canola | cytosol | 31.65 | 36.72 |
| AT1G80110.1 | Thale cress | cytosol | 31.65 | 36.58 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 35.02 | 36.49 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 33.67 | 36.1 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 36.7 | 36.09 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 37.71 | 35.67 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 32.66 | 35.4 |
| KRH33867 | Soybean | cytosol | 30.98 | 34.85 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 35.35 | 34.77 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 35.02 | 34.67 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 34.34 | 34.46 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 35.69 | 33.87 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 33.33 | 33.22 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 34.34 | 33.12 |
| PGSC0003DMT400063740 | Potato | cytosol | 31.99 | 33.1 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 34.01 | 32.17 |
| Solyc01g099990.2.1 | Tomato | cytosol | 31.31 | 32.07 |
| KRH68480 | Soybean | cytosol | 30.98 | 32.06 |
| KRG96762 | Soybean | cytosol | 30.98 | 32.06 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.29 | 31.3 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.63 | 31.21 |
| Solyc01g100000.2.1 | Tomato | cytosol | 27.95 | 30.63 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 30.64 | 28.89 |
| KRH68481 | Soybean | cytosol | 15.15 | 28.48 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 26.26 | 28.16 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 20.2 | 24.9 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 23.57 | 24.31 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 23.57 | 23.33 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 23.57 | 22.8 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 21.55 | 21.48 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 21.55 | 21.12 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G205100.1 | EnsemblPlantsGene:TraesCS7B01G205100 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7B:-:375393587..375395754
Molecular Weight (calculated)
32138.1 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.115
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSHAGGMET AEERTRVCDL PEACVAHVIA LTSPRDACRC AAVSPCFRDA AGSDVVWARF LPPDYLQLHQ APARRFSLSR SASTASATAS ASSTKKEAYL
101: GLTDAAVLVD GGGMAVWLAK ESGAKCVAIS ARRLSLPWED GEFSWRWTPH PLSRFAELAQ LVDCTCLDIY GRLPTAALTP ATAYAAYLVF ATEDAHRGLS
201: FPDQETTVSV SGSAPSRHAV CLRPDPIDAR RFKDGKGMDG AHVRGPVLRG DGWWEVEMGR LRTRDEAVVG EEAVSFEILG WYPKRGLIVE GIEFRPI
101: GLTDAAVLVD GGGMAVWLAK ESGAKCVAIS ARRLSLPWED GEFSWRWTPH PLSRFAELAQ LVDCTCLDIY GRLPTAALTP ATAYAAYLVF ATEDAHRGLS
201: FPDQETTVSV SGSAPSRHAV CLRPDPIDAR RFKDGKGMDG AHVRGPVLRG DGWWEVEMGR LRTRDEAVVG EEAVSFEILG WYPKRGLIVE GIEFRPI
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.