Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G560100.1 | Wheat | cytosol | 70.86 | 68.37 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 65.89 | 67.69 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 64.9 | 65.33 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 65.89 | 63.38 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 42.05 | 49.22 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 39.74 | 46.33 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 39.07 | 42.75 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 36.42 | 41.67 |
| Bra035198.1-P | Field mustard | cytosol | 34.11 | 40.23 |
| CDX87293 | Canola | cytosol | 34.11 | 40.23 |
| CDY39994 | Canola | cytosol | 34.11 | 40.23 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 35.1 | 39.7 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 38.74 | 39.39 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 36.42 | 38.6 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 38.41 | 38.41 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 36.09 | 37.85 |
| AT1G80110.1 | Thale cress | cytosol | 32.12 | 37.74 |
| KRH33867 | Soybean | cytosol | 32.45 | 37.12 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 36.09 | 36.82 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 33.77 | 36.82 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 36.42 | 35.95 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 33.44 | 35.94 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 37.42 | 35.76 |
| PGSC0003DMT400063740 | Potato | cytosol | 33.77 | 35.54 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 34.77 | 35.35 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 36.76 | 35.35 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.77 | 35.17 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 34.44 | 34.9 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 31.46 | 34.67 |
| PGSC0003DMT400063744 | Potato | cytosol | 32.12 | 34.4 |
| Solyc01g100010.2.1 | Tomato | cytosol | 31.13 | 33.81 |
| Solyc01g100000.2.1 | Tomato | cytosol | 30.13 | 33.58 |
| KRH68481 | Soybean | cytosol | 17.22 | 32.91 |
| KRG96762 | Soybean | cytosol | 30.79 | 32.4 |
| KRH68480 | Soybean | cytosol | 30.79 | 32.4 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 27.81 | 30.32 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.14 | 28.57 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 22.52 | 28.22 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 27.81 | 26.67 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 20.53 | 21.53 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 21.85 | 21.5 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 20.2 | 20.33 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 19.54 | 19.47 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 18.87 | 19.13 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G559800.1 | EnsemblPlantsGene:TraesCS5B01G559800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:706424632..706425850
Molecular Weight (calculated)
33188.8 Da
IEP (calculated)
4.868
GRAVY (calculated)
-0.474
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQARTTKTQ RTEDEEHEGG GMQRVPEECL AMAIGLTSPA DACRAAAVSA AFRSAADSDA VWERFLPPDC DAILERAVHL VDSSSKKELF MDLSDEHVLL
101: DDGKRSFGLQ RSTGAKCYML SVSDMGIAWG HTDLYWRELS DPDARSKVAE LVSVCWLGLS GRISSKELSP GTHYAGYLVF KLTHDAHGLS APRQVSYVEV
201: DGQVVAGSVR TPSFHPCNRA AASCGEAGEP HEHAEEDGVG GVRRYPRQRD DGWLELVIGD YHTGTGDDDV GADIKMELHE WEELKWKKGL IIQGTEFRPK
301: QA
101: DDGKRSFGLQ RSTGAKCYML SVSDMGIAWG HTDLYWRELS DPDARSKVAE LVSVCWLGLS GRISSKELSP GTHYAGYLVF KLTHDAHGLS APRQVSYVEV
201: DGQVVAGSVR TPSFHPCNRA AASCGEAGEP HEHAEEDGVG GVRRYPRQRD DGWLELVIGD YHTGTGDDDV GADIKMELHE WEELKWKKGL IIQGTEFRPK
301: QA
001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
Arabidopsis Description
PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.