Factsheet for TraesCS2B01G418200.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G400100.1	Wheat	cytosol	97.36	98.99
TraesCS2D01G397700.1	Wheat	cytosol	96.7	98.32
HORVU2Hr1G094960.4	Barley	cytosol	62.05	94.95
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	81.52	81.25
TraesCS6B01G269300.1	Wheat	cytosol	76.24	77.52
EES11284	Sorghum	cytosol	78.88	76.36
Zm00001d026078_P001	Maize	cytosol	65.68	68.86
GSMUA_Achr11P...	Banana	cytosol	60.73	64.34
GSMUA_Achr4P27200_001	Banana	cytosol	60.4	63.76
GSMUA_Achr1P03900_001	Banana	cytosol	61.06	63.36
GSMUA_Achr5P03300_001	Banana	cytosol	60.07	62.54
GSMUA_Achr4P24870_001	Banana	cytosol	61.06	61.06
KRH65151	Soybean	cytosol	55.78	60.14
KRH48244	Soybean	cytosol	55.12	59.43
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	58.75	59.33
VIT_15s0048g01930.t01	Wine grape	cytosol	56.44	59.17
TraesCS5B01G313700.1	Wheat	cytosol	55.78	58.68
PGSC0003DMT400058590	Potato	plastid	54.79	57.44
Solyc08g080360.2.1	Tomato	plastid	54.79	57.44
CDY42484	Canola	cytosol	53.47	56.84
VIT_16s0100g00520.t01	Wine grape	cytosol	52.15	56.63
CDX89095	Canola	cytosol	53.14	56.29
VIT_02s0025g04380.t01	Wine grape	cytosol	57.1	55.99
Bra014456.1-P	Field mustard	cytosol	52.81	55.94
TraesCS4B01G356300.1	Wheat	cytosol	56.44	55.7
CDY57080	Canola	cytosol	51.82	55.67
AT3G61060.2	Thale cress	cytosol	53.47	55.67
KRG91447	Soybean	cytosol, plastid	53.47	55.29
CDY16361	Canola	extracellular	34.98	55.21
KRH03980	Soybean	cytosol, plastid	51.82	54.9
KRH35368	Soybean	cytosol	53.8	54.7
Bra019781.1-P	Field mustard	cytosol	51.49	54.36
PGSC0003DMT400010881	Potato	plastid	51.82	54.33
CDX98047	Canola	cytosol	51.16	54.01
Solyc12g056410.1.1	Tomato	cytosol, plastid	50.83	53.29
CDY47354	Canola	cytosol	50.83	53.1
CDY49201	Canola	cytosol	50.83	53.1
Bra027618.1-P	Field mustard	cytosol	50.83	53.1
AT1G63090.1	Thale cress	cytosol	50.16	52.6
KRH09123	Soybean	cytosol	50.16	52.6
KRH38594	Soybean	cytosol	49.84	52.25
CDY63226	Canola	plastid	49.51	51.72
Bra027000.1-P	Field mustard	cytosol	49.51	51.72
CDY45973	Canola	cytosol	49.51	51.72
Solyc10g017960.1.1	Tomato	cytosol	49.84	51.71
PGSC0003DMT400026564	Potato	cytosol	49.84	51.19
Solyc01g091700.2.1	Tomato	cytosol	48.18	50.87
PGSC0003DMT400071397	Potato	cytosol	48.18	50.69
Solyc03g026160.2.1	Tomato	cytosol, extracellular	25.41	50.66
CDY38901	Canola	cytosol	45.54	49.64
PGSC0003DMT400037131	Potato	cytosol	47.52	48.65
AT5G52120.1	Thale cress	cytosol	46.53	48.45
CDY32595	Canola	cytosol	45.87	48.1
Bra029137.1-P	Field mustard	cytosol	45.87	47.93
AT1G12710.2	Thale cress	cytosol	51.49	46.85
KRH57251	Soybean	plastid	51.82	46.04
TraesCS4B01G262300.1	Wheat	cytosol	22.44	25.76
TraesCS6B01G423500.1	Wheat	cytosol	22.11	22.56
TraesCS6B01G423200.1	Wheat	cytosol	21.78	21.85
TraesCS5B01G558800.1	Wheat	nucleus	21.12	21.77
TraesCS7B01G205100.1	Wheat	cytosol	21.12	21.55
TraesCS6B01G421100.1	Wheat	cytosol	22.44	21.52
TraesCS6B01G422400.1	Wheat	cytosol	20.46	20.81
TraesCS6B01G422300.1	Wheat	cytosol	20.13	20.61
TraesCS3B01G094500.1	Wheat	cytosol	20.79	20.59
TraesCS5B01G558600.1	Wheat	cytosol	18.48	20.44
TraesCS6B01G423400.1	Wheat	cytosol	21.12	20.38
TraesCS3B01G018900.1	Wheat	cytosol	19.47	19.67
TraesCS5B01G559800.1	Wheat	cytosol	19.47	19.54
TraesCS7B01G449100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.47	19.16
TraesCS5B01G560100.1	Wheat	cytosol	19.14	18.53
TraesCS5B01G560000.1	Wheat	cytosol	19.14	18.47
TraesCS7B01G448100.1	Wheat	cytosol, extracellular	18.48	17.78
TraesCS3B01G097600.1	Wheat	cytosol	15.18	16.61
TraesCS6B01G422200.1	Wheat	mitochondrion	10.56	13.28

Protein Annotations

EnsemblPlants:TraesCS2B01G418200.2	EnsemblPlantsGene:TraesCS2B01G418200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF4	PFAM:PF14299
PFscan:PS50181	SEG:seg	SUPFAM:SSF81383	MapMan:19.2.2.8.1.4.6	:	:

Description

No Description!

Coordinates

chr2B:-:598963458..598966156

Molecular Weight (calculated)

33772.9 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.273

Length

303 amino acids

Sequence
(BLAST)

001: MGAGASNMEG SEGWGQTSLG DMPESCVAPV LLYLDPPEIC LVARLNRAFR GAASADCVWA TKLPANYRYL AALAAAADDD SSSDGSVEGN GRCSSSVATK
101: KEKYARLCRP TPFDGGTKEF WIQKSKGGLC MSISSKALAI TGIDDRRYWS HLTTDESSFF CYRFHSVAYL QQIWWLEVAG EIDFCFPAGS YSLLFRLHLG
201: RPHKRMGRRV YDSELIYGWD IKPTRFQLST SDGQHTTSDY HLDGPGHWIL YHVGDFVISS SDELIKLKFS MIQIDCTHTK GGLCVDSVFI YPKDHQPEEC
301: IRK

Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)

001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F

Arabidopsis Description

AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.