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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_18s0001g14860.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63090.1 VIT_18s0001g14860.t01 AT5G42190.1 12795696
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400058590 Potato plastid 63.75 68.17
VIT_15s0048g01930.t01 Wine grape cytosol 63.11 67.47
Solyc08g080360.2.1 Tomato plastid 63.11 67.47
KRH03980 Soybean cytosol, plastid 61.16 66.08
CDY57080 Canola cytosol 60.19 65.96
HORVU1Hr1G048690.1 Barley peroxisome 36.25 65.88
PGSC0003DMT400010881 Potato plastid 61.49 65.74
HORVU2Hr1G094960.4 Barley cytosol 42.07 65.66
GSMUA_Achr4P27200_001 Banana cytosol 60.84 65.51
Bra019781.1-P Field mustard cytosol 60.19 64.81
GSMUA_Achr1P03900_001 Banana cytosol 61.16 64.73
Solyc12g056410.1.1 Tomato cytosol, plastid 60.52 64.71
CDX98047 Canola cytosol 59.87 64.46
VIT_16s0100g00520.t01 Wine grape cytosol 57.28 63.44
GSMUA_Achr4P24870_001 Banana cytosol 62.14 63.37
GSMUA_Achr11P... Banana cytosol 58.58 63.29
GSMUA_Achr5P03300_001 Banana cytosol 59.22 62.89
CDY16361 Canola extracellular 38.84 62.5
AT1G63090.1 Thale cress cytosol 57.28 61.25
Bra027618.1-P Field mustard cytosol 56.63 60.34
CDY47354 Canola cytosol 56.63 60.34
CDY49201 Canola cytosol 56.63 60.34
CDY45973 Canola cytosol 56.31 60.0
Bra027000.1-P Field mustard cytosol 55.99 59.66
CDY63226 Canola plastid 55.99 59.66
Os03t0116700-01 Rice cytosol, extracellular 57.28 59.6
Os02t0675800-01 Rice cytosol 56.63 58.92
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 57.93 58.88
EER95641 Sorghum cytosol 55.99 58.84
EER94629 Sorghum plasma membrane 57.28 58.8
Zm00001d029673_P001 Maize plasma membrane 56.31 58.78
GSMUA_Achr3P12400_001 Banana cytosol 54.69 58.68
GSMUA_Achr7P05860_001 Banana cytosol 55.02 58.62
TraesCS2D01G397700.1 Wheat cytosol 56.31 58.39
TraesCS2A01G400100.1 Wheat cytosol 56.31 58.39
Os09t0525300-01 Rice cytosol 53.07 58.36
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 56.63 58.33
TraesCS6D01G237300.1 Wheat cytosol 55.99 58.05
TraesCS6A01G256100.1 Wheat cytosol 55.99 58.05
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 56.31 58.0
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 56.63 57.95
TraesCS6B01G269300.1 Wheat cytosol 55.66 57.72
Zm00001d027361_P001 Maize cytosol 55.66 57.72
TraesCS1A01G188700.1 Wheat plasma membrane 56.31 57.24
TraesCS2B01G418200.2 Wheat cytosol 55.99 57.1
VIT_08s0007g04190.t01 Wine grape cytosol 54.69 56.52
AT1G12710.2 Thale cress cytosol 60.52 56.16
KXG31015 Sorghum cytosol 54.37 55.81
HORVU5Hr1G080530.1 Barley cytosol 51.78 55.75
TraesCS5D01G319500.1 Wheat cytosol 51.78 55.75
Zm00001d021224_P001 Maize cytosol 53.4 55.74
TraesCS5B01G313700.1 Wheat cytosol 51.78 55.56
Zm00001d051447_P002 Maize cytosol 53.07 55.41
EER99217 Sorghum cytosol 53.4 55.18
KRH57251 Soybean plastid 60.84 55.13
TraesCS5A01G312700.1 Wheat cytosol 51.13 55.05
TraesCS4B01G356300.1 Wheat cytosol 54.05 54.4
TraesCS5A01G525700.1 Wheat cytosol 53.72 54.25
GSMUA_Achr11P... Banana cytosol 31.72 54.14
EES11284 Sorghum cytosol 54.69 53.99
TraesCS4D01G350000.1 Wheat cytosol 53.4 53.75
Os10t0522400-01 Rice cytosol 27.51 51.52
Zm00001d026078_P001 Maize cytosol 46.28 49.48
HORVU4Hr1G086110.1 Barley cytosol 23.62 48.03
Zm00001d021854_P001 Maize cytosol 12.3 43.18
Zm00001d024256_P001 Maize cytosol, mitochondrion 34.63 42.97
HORVU2Hr1G049730.1 Barley cytosol 21.36 38.82
Zm00001d035636_P001 Maize plastid 32.69 38.7
HORVU5Hr1G055050.1 Barley mitochondrion 21.04 38.24
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 27.18 35.44
VIT_14s0060g02020.t01 Wine grape cytosol 23.95 25.96
VIT_14s0060g02000.t01 Wine grape cytosol 23.95 25.69
VIT_05s0051g00080.t01 Wine grape cytosol 21.36 25.0
VIT_14s0060g01990.t01 Wine grape cytosol 22.33 24.91
VIT_00s0214g00060.t01 Wine grape cytosol 22.98 24.74
VIT_00s0214g00130.t01 Wine grape cytosol 21.68 24.19
VIT_00s0214g00150.t01 Wine grape cytosol 22.65 22.88
VIT_00s0214g00040.t01 Wine grape cytosol, plastid 23.3 20.63
VIT_00s0214g00090.t01 Wine grape cytosol 22.01 20.18
VIT_00s0214g00160.t01 Wine grape cytosol 20.06 19.81
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:100241013wikigene:100241013MapMan:19.2.2.8.1.4.6ProteinID:CBI34744ProteinID:CBI34744.3
UniProt:D7TW69InterPro:F-box-like_dom_sfInterPro:F-box_domEMBL:FN596251GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR001810EntrezGene:LOC100241013wikigene:LOC100241013PFAM:PF00646PFAM:PF14299
InterPro:PP2-likePFscan:PS50181PANTHER:PTHR31960PANTHER:PTHR31960:SF2SMART:SM00256SUPFAM:SSF81383
TIGR:TC56732UniParc:UPI0001BE4346ArrayExpress:VIT_02s0025g04380EnsemblPlantsGene:VIT_02s0025g04380EnsemblPlants:VIT_02s0025g04380.t01unigene:Vvi.8540
RefSeq:XP_002282844RefSeq:XP_002282844.1SEG:seg:::
Description
No Description!
Coordinates
chr2:+:3852855..3856475
Molecular Weight (calculated)
35280.3 Da
IEP (calculated)
7.257
GRAVY (calculated)
-0.211
Length
309 amino acids
Sequence
(BLAST)
001: MGTGVSLLAC ENEGCPSRPR LGDLPEDCVA LVLSYLDPPE ICKLAKLNRA FRGASRADLV WEPKLPSNYC LVIEKVFKDF PENLCKKEIY ARLCQPNPFD
101: GGTKKAWLDK RTGGVCLSIS SKGLAITGID DRRYWTYIPT EESRFNTVAY VQQIWWLEVD GEVDFPFPAG TYSIFFRLQL GRASKRLGRR ICNPEHVHGW
201: DIKPVRFQLW TSDGQHATSQ CFLDEPGRWI QYHAADFVVD NSNAPTKIKF SMTQIDCTHT KGGLCVDSVL IYPREFRERE IINVSSKESL FFVSLSCLFL
301: WEYTLGVFY
Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)
001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
Arabidopsis Description
AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.