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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G319500.1 Wheat cytosol 97.56 97.56
TraesCS5B01G313700.1 Wheat cytosol 97.21 96.88
TraesCS5A01G312700.1 Wheat cytosol 96.17 96.17
Os09t0525300-01 Rice cytosol 80.84 82.56
Zm00001d021224_P001 Maize cytosol 78.75 76.35
EER99217 Sorghum cytosol 79.44 76.25
HORVU2Hr1G094960.4 Barley cytosol 44.25 64.14
GSMUA_Achr7P05860_001 Banana cytosol 64.81 64.14
GSMUA_Achr3P12400_001 Banana cytosol 63.07 62.85
HORVU1Hr1G048690.1 Barley peroxisome 36.59 61.76
Zm00001d024256_P001 Maize cytosol, mitochondrion 51.57 59.44
VIT_15s0048g01930.t01 Wine grape cytosol 57.49 57.09
CDY42484 Canola cytosol 56.45 56.84
CDX89095 Canola cytosol 56.45 56.64
Bra014456.1-P Field mustard cytosol 56.45 56.64
GSMUA_Achr11P... Banana cytosol 35.54 56.35
VIT_16s0100g00520.t01 Wine grape cytosol 54.7 56.27
KRH03980 Soybean cytosol, plastid 55.75 55.94
AT3G61060.2 Thale cress cytosol 56.1 55.33
Zm00001d035636_P001 Maize plastid 49.83 54.79
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 57.49 54.64
Solyc08g080360.2.1 Tomato plastid 54.7 54.33
PGSC0003DMT400058590 Potato plastid 54.36 53.98
KRH65151 Soybean cytosol 52.61 53.74
KRH38594 Soybean cytosol 54.01 53.63
Solyc10g017960.1.1 Tomato cytosol 54.36 53.42
KRH48244 Soybean cytosol 52.26 53.38
CDY57080 Canola cytosol 52.26 53.19
PGSC0003DMT400010881 Potato plastid 53.31 52.94
KRH09123 Soybean cytosol 53.31 52.94
Solyc12g056410.1.1 Tomato cytosol, plastid 53.31 52.94
CDY16361 Canola extracellular 34.84 52.08
Bra019781.1-P Field mustard cytosol 51.92 51.92
KRG91447 Soybean cytosol, plastid 52.96 51.88
VIT_02s0025g04380.t01 Wine grape cytosol 55.75 51.78
CDX98047 Canola cytosol 51.57 51.57
KRH35368 Soybean cytosol 53.31 51.34
PGSC0003DMT400026564 Potato cytosol 52.61 51.19
CDY38901 Canola cytosol 49.48 51.08
PGSC0003DMT400071397 Potato cytosol 50.52 50.35
CDY32595 Canola cytosol 50.17 49.83
Solyc01g091700.2.1 Tomato cytosol 49.83 49.83
AT5G52120.1 Thale cress cytosol 50.17 49.48
Solyc03g026160.2.1 Tomato cytosol, extracellular 26.13 49.34
HORVU4Hr1G086110.1 Barley cytosol 26.13 49.34
Bra029137.1-P Field mustard cytosol 49.83 49.31
Bra027618.1-P Field mustard cytosol 49.48 48.97
CDY47354 Canola cytosol 49.48 48.97
CDY49201 Canola cytosol 49.48 48.97
CDY63226 Canola plastid 49.13 48.62
CDY45973 Canola cytosol 48.78 48.28
Bra027000.1-P Field mustard cytosol 48.78 48.28
AT1G63090.1 Thale cress cytosol 48.43 48.1
KRH57251 Soybean plastid 55.05 46.33
PGSC0003DMT400037131 Potato cytosol 47.04 45.61
AT1G12710.2 Thale cress cytosol 51.92 44.74
HORVU5Hr1G055050.1 Barley mitochondrion 21.6 36.47
HORVU2Hr1G049730.1 Barley cytosol 21.6 36.47
HORVU4Hr1G040780.1 Barley mitochondrion, plastid 14.98 34.4
HORVU2Hr1G104500.6 Barley cytosol 24.39 26.72
HORVU6Hr1G089430.1 Barley cytosol, plastid 26.13 23.66
HORVU7Hr1G072570.3 Barley cytosol 23.69 23.13
HORVU3Hr1G014270.1 Barley cytosol 24.04 22.12
HORVU7Hr1G012610.1 Barley cytosol 22.65 22.03
HORVU6Hr1G090000.1 Barley cytosol, plastid 24.39 20.71
HORVU0Hr1G021610.3 Barley cytosol 22.65 20.0
HORVU6Hr1G090010.2 Barley cytosol, nucleus, plastid 23.0 19.41
HORVU5Hr1G124090.2 Barley cytosol 19.86 18.81
HORVU6Hr1G089480.1 Barley cytosol, extracellular 9.06 15.2
Protein Annotations
EMBL:AK360241EMBL:AK365412EnsemblPlants:HORVU5Hr1G080530.1EnsemblPlantsGene:HORVU5Hr1G080530GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810InterPro:PP2-likePANTHER:PTHR31960
PANTHER:PTHR31960:SF9PFAM:PF14299PFscan:PS50181SEG:segSUPFAM:SSF81383UniParc:UPI0002005919
UniProt:F2D8M9MapMan:19.2.2.8.1.4.6::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D8M9]
Coordinates
chrchr5H:+:561600789..561603671
Molecular Weight (calculated)
31941.2 Da
IEP (calculated)
8.826
GRAVY (calculated)
-0.305
Length
287 amino acids
Sequence
(BLAST)
001: MGAVGSSARR GGGTALGDLP ENCVAEVMLR LNPTEICGMA RLSRTFRGAA SGDAVWEAKL PRNYARLLAA AGGGDEEAAA LEAEAIPKKE VYARLCRRNS
101: LDGGTKEFWL DKAGGGTCMT IYSRALSITG IDDRRYWNFI PNDESRFRSV AYLSQIWWFE VRGEVKFCFP EGTYSLFFRI HLGRPFKRLG RRVYSAEHIH
201: GWDVKPVRFQ LSTSDGQQAQ SKCYLTDPGV WIYHHVGDFA VKNSNEPLNI QFAMVQIDCT HTKGGLCMDS VVIKPKCLAR KGPRSCE
Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)
001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
Arabidopsis Description
AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.