Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G320400.1 | Wheat | cytosol | 50.16 | 59.38 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 49.84 | 55.11 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 40.59 | 46.95 |
| EES05998 | Sorghum | cytosol | 41.58 | 45.32 |
| Os02t0813350-01 | Rice | cytosol | 43.89 | 44.78 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 43.23 | 43.38 |
| EES05996 | Sorghum | cytosol | 39.6 | 43.01 |
| OQU85929 | Sorghum | cytosol | 40.26 | 42.81 |
| Os02t0813083-00 | Rice | extracellular | 15.84 | 42.11 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 46.2 | 41.42 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 34.98 | 41.25 |
| Os02t0813166-00 | Rice | cytosol, plastid | 34.98 | 40.46 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 39.27 | 40.34 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 43.89 | 39.12 |
| CDY39994 | Canola | cytosol | 31.68 | 37.5 |
| Bra035198.1-P | Field mustard | cytosol | 31.02 | 36.72 |
| CDX87293 | Canola | cytosol | 31.02 | 36.72 |
| AT1G80110.1 | Thale cress | cytosol | 30.36 | 35.8 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.35 | 34.3 |
| PGSC0003DMT400063740 | Potato | cytosol | 31.35 | 33.1 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 17.16 | 32.5 |
| Solyc01g099990.2.1 | Tomato | cytosol | 31.02 | 32.41 |
| KRH33867 | Soybean | cytosol | 28.05 | 32.2 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 33.33 | 31.86 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 30.36 | 31.29 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 29.7 | 31.25 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 29.37 | 31.23 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 31.35 | 30.45 |
| PGSC0003DMT400063744 | Potato | cytosol | 27.39 | 29.43 |
| KRH68481 | Soybean | cytosol | 15.18 | 29.11 |
| Solyc01g100010.2.1 | Tomato | cytosol | 26.07 | 28.42 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 30.36 | 28.31 |
| KRH68480 | Soybean | cytosol | 25.41 | 26.83 |
| KRG96762 | Soybean | cytosol | 24.75 | 26.13 |
| Solyc01g100000.2.1 | Tomato | cytosol | 23.1 | 25.83 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 14.19 | 25.15 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 10.89 | 21.71 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 18.81 | 19.86 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 11.88 | 18.18 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 17.82 | 17.88 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 9.24 | 16.47 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 8.91 | 15.88 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 8.91 | 15.88 |
| HORVU4Hr1G040780.1 | Barley | mitochondrion, plastid | 5.28 | 12.8 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G124090.2 | EnsemblPlantsGene:HORVU5Hr1G124090 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF13 |
| PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI000B4623ED | UniProt:A0A287T189 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:665176518..665181669
Molecular Weight (calculated)
34113.9 Da
IEP (calculated)
6.160
GRAVY (calculated)
-0.233
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPFPVWSGY GPAPSDCRRY LRASPGAFPS GIQEIGFDRA NDEIGRLPEE LLSAVLAKTT ARDASRAAAV SQPFRAAADS DAVWTCFVPA LTDEELEAPA
101: PRSKKELFFL LLERPVLLQD GLMAMWLDRE TLAKCYMLSA RKLFIASGDM PQHWSWIPLS DSRFSQGAQL IRVTWFEIQG QIHRTMLSPN STYVAYLVFK
201: PVGDYPLSTM FGILRASVRT EEANLFRDVL LDEHWPPRRW RGCDVAERPR LRADGWKEVE LGQFYNAGGE DGEVSFGLME TNQRGVKARL ILHGIEIRCL
301: KSG
101: PRSKKELFFL LLERPVLLQD GLMAMWLDRE TLAKCYMLSA RKLFIASGDM PQHWSWIPLS DSRFSQGAQL IRVTWFEIQG QIHRTMLSPN STYVAYLVFK
201: PVGDYPLSTM FGILRASVRT EEANLFRDVL LDEHWPPRRW RGCDVAERPR LRADGWKEVE LGQFYNAGGE DGEVSFGLME TNQRGVKARL ILHGIEIRCL
301: KSG
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.