Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05996 | Sorghum | cytosol | 75.09 | 76.7 |
| EES05998 | Sorghum | cytosol | 63.16 | 64.75 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 52.28 | 56.23 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 51.23 | 55.73 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 50.88 | 55.34 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 51.23 | 55.3 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 56.14 | 54.24 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 48.77 | 54.09 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 56.14 | 53.87 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 55.79 | 53.54 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 55.44 | 53.2 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 55.44 | 52.32 |
| Os02t0813350-01 | Rice | cytosol | 54.39 | 52.19 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 54.39 | 52.19 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 55.79 | 50.48 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 46.32 | 50.38 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 55.44 | 50.32 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 54.04 | 50.16 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 55.09 | 50.16 |
| Os02t0813166-00 | Rice | cytosol, plastid | 45.26 | 49.24 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 50.88 | 49.15 |
| KXG31332 | Sorghum | cytosol | 51.93 | 48.52 |
| KXG31333 | Sorghum | cytosol | 50.88 | 47.7 |
| TraesCS4A01G041300.1 | Wheat | plastid | 52.28 | 46.56 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 55.44 | 46.47 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 55.09 | 46.45 |
| TraesCSU01G190600.1 | Wheat | cytosol, mitochondrion | 51.93 | 46.25 |
| TraesCSU01G197600.1 | Wheat | cytosol, mitochondrion | 51.93 | 46.25 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 17.19 | 45.37 |
| KXG28410 | Sorghum | cytosol | 41.75 | 44.07 |
| Os02t0813083-00 | Rice | extracellular | 17.54 | 43.86 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 39.3 | 43.75 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 51.23 | 43.45 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 39.65 | 41.24 |
| Bra035198.1-P | Field mustard | cytosol | 36.49 | 40.62 |
| CDX87293 | Canola | cytosol | 36.49 | 40.62 |
| CDY39994 | Canola | cytosol | 36.49 | 40.62 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 42.81 | 40.26 |
| AT1G80110.1 | Thale cress | cytosol | 35.79 | 39.69 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 36.49 | 37.55 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 20.7 | 36.88 |
| EES05994 | Sorghum | cytosol | 42.81 | 36.09 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 35.79 | 35.79 |
| KRH33867 | Soybean | cytosol | 32.98 | 35.61 |
| KRH68480 | Soybean | cytosol | 35.09 | 34.84 |
| PGSC0003DMT400063740 | Potato | cytosol | 35.09 | 34.84 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 35.09 | 34.72 |
| Solyc01g099990.2.1 | Tomato | cytosol | 34.74 | 34.14 |
| KRG96762 | Soybean | cytosol | 34.04 | 33.8 |
| Solyc01g100000.2.1 | Tomato | cytosol | 30.88 | 32.47 |
| KRH68481 | Soybean | cytosol | 17.89 | 32.28 |
| PGSC0003DMT400063744 | Potato | cytosol | 30.88 | 31.21 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.82 | 30.58 |
| EER99217 | Sorghum | cytosol | 25.96 | 24.75 |
| EER95641 | Sorghum | cytosol | 25.26 | 24.49 |
| OQU92610 | Sorghum | mitochondrion | 31.93 | 24.4 |
| EER94629 | Sorghum | plasma membrane | 24.56 | 23.26 |
| OQU85932 | Sorghum | mitochondrion | 43.86 | 22.28 |
| EES11284 | Sorghum | cytosol | 22.11 | 20.13 |
| KXG31015 | Sorghum | cytosol | 20.7 | 19.6 |
Protein Annotations
| EnsemblPlants:OQU85929 | EnsemblPlantsGene:SORBI_3004G340800 | EntrezGene:8056427 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF13 |
| PFAM:PF14299 | PFscan:PS50181 | ProteinID:OQU85929 | ProteinID:OQU85929.1 | RefSeq:XP_002453021.1 | SEG:seg |
| SUPFAM:SSF81383 | UniParc:UPI0001A85BEC | UniProt:A0A1Z5RQT8 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr4:+:67237934..67239979
Molecular Weight (calculated)
31802.9 Da
IEP (calculated)
6.171
GRAVY (calculated)
-0.245
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTATAPAR CEIERLPDDL LSATLVRTGP RDSCRATAVS PDFRAAADSD AVWSSLLPRD LPPLAVGELP ADPLLTKKQL FMRLSDPGRP VLLADRFTSM
101: WLDRATGAKC YMLSARKLGI AWGDTPQYWR WIPINLYRIS EAAELRHVWW LEIRGEIDSK MLSRHTTYSA YIVFSLAQRR LGLHYTCKEA SVSLGGGSSR
201: SRRHVCLDEG HDSADTWPSL RGNLPEDTHF PRVRGDHWME VELGVFCIGE DNDDGEVSVS LIETSVIKSG LVVLGIEIRP KEQGV
101: WLDRATGAKC YMLSARKLGI AWGDTPQYWR WIPINLYRIS EAAELRHVWW LEIRGEIDSK MLSRHTTYSA YIVFSLAQRR LGLHYTCKEA SVSLGGGSSR
201: SRRHVCLDEG HDSADTWPSL RGNLPEDTHF PRVRGDHWME VELGVFCIGE DNDDGEVSVS LIETSVIKSG LVVLGIEIRP KEQGV
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Arabidopsis Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.