CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053172_P001	Maize	cytosol	71.11	64.86
EES05998	Sorghum	cytosol	52.22	50.72
EES05996	Sorghum	cytosol	49.26	47.67
GSMUA_Achr5P10170_001	Banana	cytosol	25.56	43.12
KXG31332	Sorghum	cytosol	48.52	42.95
KXG31333	Sorghum	cytosol	47.41	42.11
OQU85929	Sorghum	cytosol	44.07	41.75
OQU85933	Sorghum	cytosol, mitochondrion	39.26	41.25
Bra035198.1-P	Field mustard	cytosol	38.15	40.23
CDX87293	Canola	cytosol	38.15	40.23
CDY39994	Canola	cytosol	37.41	39.45
AT1G80110.1	Thale cress	cytosol	36.3	38.13
KRH33867	Soybean	cytosol	36.3	37.12
VIT_14s0060g02020.t01	Wine grape	cytosol	37.78	35.79
PGSC0003DMT400063740	Potato	cytosol	37.41	35.19
VIT_14s0060g01990.t01	Wine grape	cytosol	35.93	35.02
VIT_14s0060g02000.t01	Wine grape	cytosol	37.04	34.72
EES05994	Sorghum	cytosol	42.96	34.32
Solyc01g099990.2.1	Tomato	cytosol	35.93	33.45
PGSC0003DMT400063744	Potato	cytosol	34.81	33.33
KRH68480	Soybean	cytosol	35.19	33.1
KRG96762	Soybean	cytosol	34.44	32.4
Solyc01g100010.2.1	Tomato	cytosol	33.33	32.37
KRH68481	Soybean	cytosol	17.78	30.38
Solyc01g100000.2.1	Tomato	cytosol	30.37	30.26
OQU92610	Sorghum	mitochondrion	31.85	23.06
EER94629	Sorghum	plasma membrane	23.7	21.26
EER95641	Sorghum	cytosol	22.22	20.41
EER99217	Sorghum	cytosol	22.59	20.4
KXG31015	Sorghum	cytosol	21.48	19.27
EES11284	Sorghum	cytosol	21.85	18.85
OQU85932	Sorghum	mitochondrion	35.19	16.93

Protein Annotations

EnsemblPlants:KXG28410	EnsemblPlantsGene:SORBI_3005G119100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2	PFAM:PF14299	ProteinID:KXG28410	ProteinID:KXG28410.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI0003C66B60	UniProt:A0A1B6PRX8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr5:+:52009210..52014439

Molecular Weight (calculated)

30285.8 Da

IEP (calculated)

5.203

GRAVY (calculated)

-0.433

Length

270 amino acids

Sequence
(BLAST)

001: MEDIRRLPED VLTSVMSRAA TGPRAACVAA TVSPAFRSAA DSDTVWSRFL PADLPPLVYP SSSPPPRSKK ELFLRLSGNH VLLEDGLTSA WLHRETGAKC
101: YMVAARAMHI VWGDAPQYWR WIPRQDSRFP ECAELLAVCW LDFSGAIESR MLSENTRYAA YLVFKMDDDC YGLDSPLQVA SIHIGEDEIS SHPVRLQNNI
201: GNQQNDGAEE GATPRLPMER PDGWMELEIG EWDNHGGEDK HFCARVRETT YGGNWKKGLI LQGVEIRPKN

Best Arabidopsis Sequence Match ( AT2G02360.1 )
(BLAST)

001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL

Arabidopsis Description

PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.