CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021224_P001	Maize	cytosol	92.64	93.58
Os09t0525300-01	Rice	cytosol	77.93	82.92
TraesCS5D01G319500.1	Wheat	cytosol	77.59	80.84
TraesCS5B01G313700.1	Wheat	cytosol	76.92	79.86
TraesCS5A01G312700.1	Wheat	cytosol	76.59	79.79
HORVU5Hr1G080530.1	Barley	cytosol	76.25	79.44
Zm00001d024256_P001	Maize	cytosol, mitochondrion	59.87	71.89
Zm00001d035636_P001	Maize	plastid	57.86	66.28
GSMUA_Achr3P12400_001	Banana	cytosol	62.54	64.93
GSMUA_Achr7P05860_001	Banana	cytosol	61.87	63.79
GSMUA_Achr11P...	Banana	cytosol	36.79	60.77
VIT_15s0048g01930.t01	Wine grape	cytosol	56.19	58.13
VIT_16s0100g00520.t01	Wine grape	cytosol	53.51	57.35
EER95641	Sorghum	cytosol	55.52	56.46
CDX89095	Canola	cytosol	53.85	56.29
CDY42484	Canola	cytosol	53.51	56.14
Bra014456.1-P	Field mustard	cytosol	53.51	55.94
EES11284	Sorghum	cytosol	58.53	55.91
CDY57080	Canola	cytosol	52.51	55.67
KRH03980	Soybean	cytosol, plastid	53.18	55.59
KRH65151	Soybean	cytosol	52.17	55.52
EER94629	Sorghum	plasma membrane	55.85	55.48
Solyc08g080360.2.1	Tomato	plastid	53.51	55.36
KRH48244	Soybean	cytosol	51.84	55.16
KXG31015	Sorghum	cytosol	55.52	55.15
PGSC0003DMT400058590	Potato	plastid	53.18	55.02
Bra019781.1-P	Field mustard	cytosol	52.51	54.7
AT3G61060.2	Thale cress	cytosol	53.18	54.64
CDX98047	Canola	cytosol	52.17	54.36
Solyc12g056410.1.1	Tomato	cytosol, plastid	52.51	54.33
CDY16361	Canola	extracellular	34.78	54.17
PGSC0003DMT400010881	Potato	plastid	52.17	53.98
Solyc10g017960.1.1	Tomato	cytosol	52.17	53.42
VIT_02s0025g04380.t01	Wine grape	cytosol	55.18	53.4
Bra027618.1-P	Field mustard	cytosol	50.84	52.41
CDY47354	Canola	cytosol	50.84	52.41
CDY49201	Canola	cytosol	50.84	52.41
KRH09123	Soybean	cytosol	50.5	52.25
KRH38594	Soybean	cytosol	50.5	52.25
PGSC0003DMT400026564	Potato	cytosol	51.51	52.2
KRG91447	Soybean	cytosol, plastid	50.84	51.88
AT1G63090.1	Thale cress	cytosol	49.83	51.56
Bra027000.1-P	Field mustard	cytosol	49.83	51.38
CDY45973	Canola	cytosol	49.83	51.38
CDY63226	Canola	plastid	49.83	51.38
Solyc01g091700.2.1	Tomato	cytosol	49.16	51.22
PGSC0003DMT400071397	Potato	cytosol	49.16	51.04
KRH35368	Soybean	cytosol	50.84	51.01
Solyc03g026160.2.1	Tomato	cytosol, extracellular	24.75	48.68
CDY38901	Canola	cytosol	44.82	48.2
CDY32595	Canola	cytosol	45.82	47.4
PGSC0003DMT400037131	Potato	cytosol	46.82	47.3
AT1G12710.2	Thale cress	cytosol	52.51	47.15
KRH57251	Soybean	plastid	53.51	46.92
Bra029137.1-P	Field mustard	cytosol	45.48	46.9
AT5G52120.1	Thale cress	cytosol	45.48	46.74
EES05998	Sorghum	cytosol	24.75	26.62
EES05996	Sorghum	cytosol	24.75	26.52
OQU85929	Sorghum	cytosol	24.75	25.96
KXG31332	Sorghum	cytosol	25.75	25.25
KXG31333	Sorghum	cytosol	24.75	24.34
KXG28410	Sorghum	cytosol	20.4	22.59
EES05994	Sorghum	cytosol	24.08	21.3
OQU85933	Sorghum	cytosol, mitochondrion	18.06	21.01
OQU92610	Sorghum	mitochondrion	21.07	16.89
OQU85932	Sorghum	mitochondrion	23.41	12.48

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	EntrezGene:8059028	UniProt:C5X633	EnsemblPlants:EER99217	ProteinID:EER99217
ProteinID:EER99217.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR31960
PANTHER:PTHR31960:SF9	SMART:SM00256	EnsemblPlantsGene:SORBI_3002G270200	SUPFAM:SSF81383	unigene:Sbi.1299	UniParc:UPI0001A83CFA
RefSeq:XP_002462696.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:65394279..65397267

Molecular Weight (calculated)

33406.9 Da

IEP (calculated)

9.353

GRAVY (calculated)

-0.347

Length

299 amino acids

Sequence
(BLAST)

001: MGAVASSAAG GGRGRGGDGT ALGDLPENCV AEVLLRLDPL EICRMARLSR TFRGAASGDG VWESKLPRNY ARLLAIAAAG DGERGQAAGS APEAEPLPKK
101: ELYARLCRRN RFDGGKKEFW LDKGGGGLCM SISSRALSIT GIDDRRYWNF IPNDESRFHT VAYLSQIWWF EVRGEVDFFF PEGTYSLFYR VHLGRPFKRL
201: GRRVYSSEHI HGWDIKPVRF QMSTSDGQHV QSKCYLTDPG IWINHHVGDF IVKDSSRPIN IRFAMIQIDC THTKGGLCVD SVVVKPQYLT QKKAPWTYV

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.