CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31333	Sorghum	cytosol	87.21	87.5
EES05998	Sorghum	cytosol	54.1	59.35
Os02t0813000-00	Rice	cytosol	41.97	55.65
EES05996	Sorghum	cytosol	49.84	54.48
OQU85929	Sorghum	cytosol	48.52	51.93
OQU85933	Sorghum	cytosol, mitochondrion	41.97	49.81
KXG28410	Sorghum	cytosol	42.95	48.52
GSMUA_Achr5P10170_001	Banana	cytosol	23.28	44.38
AT1G80110.1	Thale cress	cytosol	36.72	43.58
CDY39994	Canola	cytosol	35.08	41.8
Bra035198.1-P	Field mustard	cytosol	34.75	41.41
CDX87293	Canola	cytosol	34.75	41.41
KRH33867	Soybean	cytosol	35.08	40.53
VIT_14s0060g02020.t01	Wine grape	cytosol	37.38	40.0
VIT_14s0060g02000.t01	Wine grape	cytosol	37.05	39.24
EES05994	Sorghum	cytosol	41.97	37.87
VIT_14s0060g01990.t01	Wine grape	cytosol	34.1	37.55
PGSC0003DMT400063740	Potato	cytosol	34.1	36.24
Solyc01g100010.2.1	Tomato	cytosol	31.48	34.53
Solyc01g099990.2.1	Tomato	cytosol	32.79	34.48
PGSC0003DMT400063744	Potato	cytosol	31.8	34.4
Os02t0812600-00	Rice	extracellular	51.15	34.21
Solyc01g100000.2.1	Tomato	cytosol	29.51	33.21
KRG96762	Soybean	cytosol	30.82	32.75
KRH68480	Soybean	cytosol	30.82	32.75
KRH68481	Soybean	cytosol	15.08	29.11
EER99217	Sorghum	cytosol	25.25	25.75
OQU92610	Sorghum	mitochondrion	31.15	25.47
EER94629	Sorghum	plasma membrane	24.26	24.58
EER95641	Sorghum	cytosol	23.61	24.49
EES11284	Sorghum	cytosol	23.28	22.68
KXG31015	Sorghum	cytosol	21.97	22.26
OQU85932	Sorghum	mitochondrion	35.74	19.43

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	UniProt:A0A194YT22	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	EnsemblPlants:KXG31332	ProteinID:KXG31332	ProteinID:KXG31332.1
PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2	EnsemblPlantsGene:SORBI_3004G340566
SUPFAM:SSF81383	UniParc:UPI0007F2D672	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:67228426..67231271

Molecular Weight (calculated)

33969.3 Da

IEP (calculated)

9.322

GRAVY (calculated)

-0.238

Length

305 amino acids

Sequence
(BLAST)

001: MGSAAGTCEI ARLPEDLLSA ALALTTPRDA CRAAAVSRAF RDAAGSYAVW TRFVPRDLPP VADGELAGPA PPSKKERFLR LSDCRCPVLL ADGLRIQPVP
101: KNPLLAYGLK SMWLDRGSGA KCYMLLERGL HISWGCTPCY WHWMNLPDSR FEVAELMSVC WFEIRGKIHS KMLSRDTAYA AYIVFKIPFG SYGLDYPPQK
201: ASIDTVAGKK IIRKVCLKSY EGRHVNRQVT VPLAPEYNKS YRLGHGRNPV LPKERTDGWM ELEMGVFYNK EGDDGEVRFS LLQTSGTSKE GLIVQGIEIR
301: PKKLG

Best Arabidopsis Sequence Match ( AT2G02230.1 )
(BLAST)

001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN

Arabidopsis Description

PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.