CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31332	Sorghum	cytosol	87.5	87.21
EES05998	Sorghum	cytosol	52.3	57.19
Os02t0813000-00	Rice	cytosol	39.47	52.17
EES05996	Sorghum	cytosol	47.7	51.97
OQU85929	Sorghum	cytosol	47.7	50.88
OQU85933	Sorghum	cytosol, mitochondrion	40.46	47.86
KXG28410	Sorghum	cytosol	42.11	47.41
GSMUA_Achr5P10170_001	Banana	cytosol	23.03	43.75
AT1G80110.1	Thale cress	cytosol	35.53	42.02
Bra035198.1-P	Field mustard	cytosol	35.2	41.8
CDX87293	Canola	cytosol	35.2	41.8
CDY39994	Canola	cytosol	35.2	41.8
KRH33867	Soybean	cytosol	35.2	40.53
VIT_14s0060g02020.t01	Wine grape	cytosol	36.18	38.6
VIT_14s0060g02000.t01	Wine grape	cytosol	35.86	37.85
VIT_14s0060g01990.t01	Wine grape	cytosol	33.55	36.82
EES05994	Sorghum	cytosol	40.79	36.69
PGSC0003DMT400063740	Potato	cytosol	34.21	36.24
Solyc01g099990.2.1	Tomato	cytosol	32.89	34.48
Solyc01g100010.2.1	Tomato	cytosol	30.59	33.45
PGSC0003DMT400063744	Potato	cytosol	30.59	32.98
Os02t0812600-00	Rice	extracellular	48.68	32.46
Solyc01g100000.2.1	Tomato	cytosol	28.62	32.1
KRH68480	Soybean	cytosol	29.93	31.71
KRG96762	Soybean	cytosol	29.93	31.71
KRH68481	Soybean	cytosol	14.47	27.85
OQU92610	Sorghum	mitochondrion	31.25	25.47
EER99217	Sorghum	cytosol	24.34	24.75
EER94629	Sorghum	plasma membrane	24.01	24.25
EER95641	Sorghum	cytosol	23.36	24.15
EES11284	Sorghum	cytosol	23.03	22.36
KXG31015	Sorghum	cytosol	21.38	21.59
OQU85932	Sorghum	mitochondrion	34.21	18.54

Protein Annotations

EnsemblPlants:KXG31333	EnsemblPlantsGene:SORBI_3004G340632	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2
PFAM:PF12937	PFAM:PF14299	PFscan:PS50181	ProteinID:KXG31333	ProteinID:KXG31333.1	SEG:seg
SUPFAM:SSF81383	UniParc:UPI0007F29FD0	UniProt:A0A194YSW6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr4:+:67232589..67234186

Molecular Weight (calculated)

33983.1 Da

IEP (calculated)

10.037

GRAVY (calculated)

-0.311

Length

304 amino acids

Sequence
(BLAST)

001: MGSAAGTCEI VRLPEDLLSA ALALTTPRDA CRAAAVSRAF RDAAGSDALW ARFVPRDLPP IANGVLSGPA SPSKKERFLR ISDRHCPVLL ADGLRIRPAT
101: KNPLLAYGFE SMWLDRGSGS KCYMLLARGL HISWGDACYW RWMDLPDSRF EVAHLRNVCW FEIRGKIHSK MLSRDTAYAA YIVFKTLVES SGLDYPPQKA
201: SIDTVAGKKK IRKVCLQSYE GRHVNRQVTV PLTPEYNKSY RLGHGRNPVL PQERTDGWME LEMGVFYNKE GGDGEVRFSL LQTSRTSKRG LIVQGIEIRP
301: KKLG

Best Arabidopsis Sequence Match ( AT2G02230.1 )
(BLAST)

001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN

Arabidopsis Description

PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.