Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc09g066470.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G56250.1 | Solyc09g066470.2.1 | AT5G44110.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g100010.2.1 | Tomato | cytosol | 55.72 | 54.32 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 53.87 | 51.23 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 54.24 | 51.04 |
| KRH33867 | Soybean | cytosol | 45.76 | 46.97 |
| KRG96762 | Soybean | cytosol | 48.71 | 45.99 |
| Bra018579.1-P | Field mustard | cytosol | 46.49 | 45.32 |
| CDY71953 | Canola | cytosol | 46.49 | 45.32 |
| CDY31110 | Canola | plastid | 45.02 | 45.19 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 42.8 | 44.96 |
| KRH68480 | Soybean | cytosol | 47.6 | 44.95 |
| CDY72024 | Canola | plastid | 45.02 | 44.85 |
| Bra030758.1-P | Field mustard | cytosol | 44.28 | 44.12 |
| AT1G09155.1 | Thale cress | cytosol | 45.76 | 42.91 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 40.59 | 42.47 |
| AT1G56240.1 | Thale cress | cytosol | 44.28 | 42.25 |
| AT1G56250.1 | Thale cress | cytosol | 43.91 | 42.2 |
| CDX95006 | Canola | cytosol | 43.17 | 42.09 |
| Solyc01g099990.2.1 | Tomato | cytosol | 44.65 | 41.72 |
| Bra038174.1-P | Field mustard | cytosol | 43.54 | 41.7 |
| CDY54100 | Canola | cytosol | 43.54 | 41.7 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 39.85 | 40.45 |
| Solyc04g050990.2.1 | Tomato | cytosol | 44.28 | 40.4 |
| CDY38992 | Canola | cytosol | 42.07 | 40.28 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 40.59 | 39.86 |
| Solyc12g098190.1.1 | Tomato | cytosol | 37.27 | 38.7 |
| Solyc12g044930.1.1 | Tomato | cytosol | 36.9 | 38.17 |
| Solyc12g098200.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular | 36.53 | 37.22 |
| Solyc05g055870.2.1 | Tomato | cytosol | 42.07 | 37.01 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 33.95 | 35.11 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 20.66 | 35.0 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 33.58 | 34.73 |
| CDY62670 | Canola | cytosol | 3.69 | 34.48 |
| GSMUA_Achr8P03670_001 | Banana | nucleus | 36.16 | 34.27 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 35.42 | 34.16 |
| Os04t0280500-00 | Rice | cytosol | 18.82 | 33.77 |
| GSMUA_Achr9P02770_001 | Banana | nucleus | 35.42 | 33.68 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 36.53 | 33.0 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 32.1 | 32.95 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 35.79 | 32.88 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 32.1 | 32.83 |
| EES05998 | Sorghum | cytosol | 33.58 | 32.73 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 35.79 | 32.66 |
| Solyc12g096890.1.1 | Tomato | cytosol | 19.19 | 32.5 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 35.06 | 31.99 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 35.06 | 31.99 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 35.06 | 31.99 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 34.69 | 31.97 |
| EES05996 | Sorghum | cytosol | 32.47 | 31.54 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 12.55 | 31.48 |
| Solyc04g056680.1.1 | Tomato | cytosol | 20.66 | 31.46 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 30.26 | 31.3 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 33.21 | 31.25 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 36.53 | 31.23 |
| Solyc11g006740.1.1 | Tomato | cytosol | 21.4 | 31.18 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 33.21 | 31.14 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 34.69 | 31.13 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 35.06 | 31.05 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 16.24 | 30.99 |
| OQU85929 | Sorghum | cytosol | 32.47 | 30.88 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 16.24 | 30.77 |
| Os02t0813083-00 | Rice | extracellular | 12.92 | 30.7 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 35.79 | 30.7 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 35.79 | 30.7 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 33.58 | 30.64 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 34.69 | 30.62 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 35.79 | 30.5 |
| KXG28410 | Sorghum | cytosol | 30.26 | 30.37 |
| Os02t0813350-01 | Rice | cytosol | 33.21 | 30.3 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 33.58 | 30.13 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 32.84 | 30.07 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 34.69 | 30.03 |
| Os02t0813000-00 | Rice | cytosol | 25.46 | 30.0 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 34.69 | 29.94 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 34.69 | 29.94 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 34.32 | 29.9 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 32.84 | 29.87 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 34.69 | 29.84 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 32.47 | 29.83 |
| Zm00001d051936_P001 | Maize | cytosol | 34.32 | 29.71 |
| KXG31332 | Sorghum | cytosol | 33.21 | 29.51 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 33.21 | 29.51 |
| Zm00001d053172_P001 | Maize | cytosol | 32.1 | 29.39 |
| Solyc10g051160.1.1 | Tomato | cytosol | 29.15 | 29.26 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 33.58 | 29.17 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 34.32 | 29.06 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 32.1 | 29.0 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 32.84 | 28.99 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 31.37 | 28.91 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 27.31 | 28.91 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 31.73 | 28.86 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 32.1 | 28.81 |
| Os08t0150700-01 | Rice | cytosol | 31.73 | 28.76 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 35.79 | 28.7 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 31.37 | 28.62 |
| KXG31333 | Sorghum | cytosol | 32.1 | 28.62 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 34.32 | 28.62 |
| Os12t0131400-01 | Rice | nucleus | 31.73 | 28.48 |
| Os02t0812500-01 | Rice | cytosol | 34.69 | 28.31 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 35.42 | 28.24 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 32.1 | 28.16 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 32.47 | 28.11 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 30.63 | 27.95 |
| EES05994 | Sorghum | cytosol | 34.69 | 27.81 |
| TraesCS4A01G041300.1 | Wheat | plastid | 32.47 | 27.5 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 17.34 | 27.49 |
| Os02t0813166-00 | Rice | cytosol, plastid | 26.57 | 27.48 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 28.04 | 27.44 |
| Solyc05g053620.2.1 | Tomato | cytosol | 16.61 | 27.27 |
| TraesCSU01G190600.1 | Wheat | cytosol, mitochondrion | 32.1 | 27.19 |
| TraesCSU01G197600.1 | Wheat | cytosol, mitochondrion | 32.1 | 27.19 |
| Zm00001d032787_P001 | Maize | cytosol | 29.15 | 26.87 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 26.94 | 26.64 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 32.84 | 26.49 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 28.04 | 26.39 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.89 | 26.3 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.89 | 26.3 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 24.72 | 26.07 |
| Zm00001d024621_P001 | Maize | cytosol | 29.52 | 26.06 |
| Zm00001d018451_P001 | Maize | cytosol | 32.84 | 25.87 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 30.26 | 25.79 |
| TraesCS3A01G082500.1 | Wheat | plastid | 19.93 | 25.71 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 22.51 | 25.31 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 29.15 | 25.08 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 28.78 | 24.76 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 30.26 | 23.91 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 25.83 | 23.1 |
| Solyc10g085490.1.1 | Tomato | cytosol | 25.46 | 23.08 |
| Solyc08g080360.2.1 | Tomato | plastid | 24.35 | 22.84 |
| Solyc09g008820.2.1 | Tomato | cytosol | 25.09 | 22.74 |
| Solyc01g091700.2.1 | Tomato | cytosol | 23.99 | 22.65 |
| Os12t0129700-01 | Rice | cytosol | 31.0 | 22.52 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 23.62 | 22.15 |
| Solyc10g083730.1.1 | Tomato | cytosol | 24.35 | 22.07 |
| Solyc03g026160.2.1 | Tomato | cytosol, extracellular | 11.81 | 21.05 |
| Os02t0812600-00 | Rice | extracellular | 34.69 | 20.61 |
| Solyc10g017960.1.1 | Tomato | cytosol | 22.14 | 20.55 |
| OQU92610 | Sorghum | mitochondrion | 27.68 | 20.11 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 21.03 | 17.65 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 29.89 | 14.46 |
| OQU85932 | Sorghum | mitochondrion | 29.89 | 14.44 |
Protein Annotations
| EnsemblPlants:Solyc01g100000.2.1 | EnsemblPlantsGene:Solyc01g100000.2 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF15 |
| PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0002769136 | UniProt:K4B134 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:90085292..90086661
Molecular Weight (calculated)
30529.5 Da
IEP (calculated)
5.013
GRAVY (calculated)
-0.285
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGEDVFNEL PEDCISSILS LTSPKDTISF SLVSSFLRLV AASDFVWQTL LPSDYNKIID KSVIPLNYSS KKELFIRLCN SILIDGGKKS FALEKSSGKK
101: SFIISAGELS LLYGEEPDHW TWKSLPESRF SKVAELKVIC KLEVKAKLMT SMLSANTNYG IYFIMKITDR AFGLSSVPVE TSVEIGNQKD VHTATLDHRK
201: DEKDLPEGKQ RYERVPYKRE DGWMEIELGE FLNSGDDDED EEVTVSLKEV KGCHVKSGLV IEGVEVRPKH Y
101: SFIISAGELS LLYGEEPDHW TWKSLPESRF SKVAELKVIC KLEVKAKLMT SMLSANTNYG IYFIMKITDR AFGLSSVPVE TSVEIGNQKD VHTATLDHRK
201: DEKDLPEGKQ RYERVPYKRE DGWMEIELGE FLNSGDDDED EEVTVSLKEV KGCHVKSGLV IEGVEVRPKH Y
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.