Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72024 | Canola | plastid | 78.2 | 83.09 |
| CDY31110 | Canola | plastid | 77.16 | 82.59 |
| Bra030758.1-P | Field mustard | cytosol | 76.12 | 80.88 |
| CDY71953 | Canola | cytosol | 76.82 | 79.86 |
| Bra018579.1-P | Field mustard | cytosol | 76.82 | 79.86 |
| CDX95006 | Canola | cytosol | 75.43 | 78.42 |
| AT1G56240.1 | Thale cress | cytosol | 71.63 | 72.89 |
| AT1G56250.1 | Thale cress | cytosol | 69.9 | 71.63 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 51.56 | 52.28 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 50.87 | 51.04 |
| KRH33867 | Soybean | cytosol | 44.29 | 48.48 |
| KRH68480 | Soybean | cytosol | 46.37 | 46.69 |
| KRG96762 | Soybean | cytosol | 46.37 | 46.69 |
| Solyc01g100000.2.1 | Tomato | cytosol | 42.91 | 45.76 |
| Solyc01g100010.2.1 | Tomato | cytosol | 42.91 | 44.6 |
| PGSC0003DMT400063744 | Potato | cytosol | 43.25 | 44.33 |
| AT5G24560.1 | Thale cress | cytosol | 26.99 | 40.0 |
| AT2G02360.1 | Thale cress | nucleus | 36.68 | 38.97 |
| AT1G80110.1 | Thale cress | cytosol | 33.91 | 38.13 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 34.26 | 33.67 |
| AT2G02240.1 | Thale cress | cytosol | 35.99 | 32.5 |
| AT2G02340.1 | Thale cress | cytosol | 33.91 | 32.13 |
| AT2G02300.1 | Thale cress | cytosol | 30.45 | 30.99 |
| AT2G02250.1 | Thale cress | cytosol | 33.22 | 30.97 |
| AT2G02320.1 | Thale cress | mitochondrion | 31.49 | 29.64 |
| AT2G02230.1 | Thale cress | cytosol | 33.56 | 28.87 |
| AT2G02310.1 | Thale cress | cytosol | 30.45 | 28.66 |
| AT3G53000.1 | Thale cress | cytosol | 24.91 | 24.0 |
| AT3G61060.2 | Thale cress | cytosol | 23.53 | 23.37 |
| AT1G63090.1 | Thale cress | cytosol | 22.84 | 22.84 |
| AT5G52120.1 | Thale cress | cytosol | 22.84 | 22.68 |
| AT1G12710.2 | Thale cress | cytosol | 23.18 | 20.12 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837435 | ProteinID:AAC24090.1 | ProteinID:AEE28403.1 | ArrayExpress:AT1G09155 | EnsemblPlantsGene:AT1G09155 |
| RefSeq:AT1G09155 | TAIR:AT1G09155 | RefSeq:AT1G09155-TAIR-G | EnsemblPlants:AT1G09155.1 | TAIR:AT1G09155.1 | EMBL:AY087048 |
| Unigene:At.42239 | Symbol:AtPP2-B15 | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0030246 | RefSeq:NP_563837.1 | UniProt:O80494 | PFAM:PF14299 | PO:PO:0000037 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0025281 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF15 | SUPFAM:SSF81383 | UniParc:UPI0000162CDA |
| SEG:seg | : | : | : | : | : |
Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
Coordinates
chr1:-:2949621..2950989
Molecular Weight (calculated)
32671.0 Da
IEP (calculated)
7.021
GRAVY (calculated)
-0.389
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.