Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17599 | Canola | cytosol | 71.32 | 68.55 |
| Bra024822.1-P | Field mustard | cytosol | 54.78 | 68.35 |
| CDY03056 | Canola | cytosol | 38.24 | 66.24 |
| CDY03057 | Canola | cytosol | 55.51 | 63.71 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 64.34 | 59.52 |
| AT2G02340.1 | Thale cress | cytosol | 64.34 | 57.38 |
| AT2G02240.1 | Thale cress | cytosol | 63.6 | 54.06 |
| AT2G02250.1 | Thale cress | cytosol | 60.29 | 52.9 |
| AT2G02320.1 | Thale cress | mitochondrion | 58.46 | 51.79 |
| AT2G02310.1 | Thale cress | cytosol | 54.04 | 47.88 |
| AT2G02300.1 | Thale cress | cytosol | 49.63 | 47.54 |
| AT5G24560.1 | Thale cress | cytosol | 32.35 | 45.13 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 45.96 | 45.13 |
| Solyc04g050990.2.1 | Tomato | cytosol | 45.96 | 42.09 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 44.12 | 41.81 |
| AT2G02230.1 | Thale cress | cytosol | 51.47 | 41.67 |
| KRG92586 | Soybean | cytosol, plastid | 46.32 | 41.58 |
| PGSC0003DMT400031292 | Potato | cytosol | 45.22 | 41.41 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 45.59 | 40.52 |
| AT1G80110.1 | Thale cress | cytosol | 38.24 | 40.47 |
| Solyc05g055870.2.1 | Tomato | cytosol | 45.22 | 39.94 |
| PGSC0003DMT400060018 | Potato | cytosol | 45.22 | 39.3 |
| KRH68844 | Soybean | cytosol | 44.49 | 38.17 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 48.53 | 37.82 |
| AT1G09155.1 | Thale cress | cytosol | 38.97 | 36.68 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 45.22 | 36.5 |
| AT1G56250.1 | Thale cress | cytosol | 37.5 | 36.17 |
| AT1G56240.1 | Thale cress | cytosol | 36.76 | 35.21 |
| AT3G53000.1 | Thale cress | cytosol | 29.04 | 26.33 |
| AT3G61060.2 | Thale cress | cytosol | 26.84 | 25.09 |
| AT5G52120.1 | Thale cress | cytosol | 26.1 | 24.4 |
| AT1G63090.1 | Thale cress | cytosol | 24.26 | 22.84 |
| AT1G12710.2 | Thale cress | cytosol | 25.37 | 20.72 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EntrezGene:814767 | ProteinID:AAC78518.1 | ProteinID:AEC05569.1 | EMBL:AK227207 |
| ArrayExpress:AT2G02360 | EnsemblPlantsGene:AT2G02360 | RefSeq:AT2G02360 | TAIR:AT2G02360 | RefSeq:AT2G02360-TAIR-G | EnsemblPlants:AT2G02360.1 |
| TAIR:AT2G02360.1 | Unigene:At.41496 | Symbol:AtPP2-B10 | EMBL:BT025799 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR001810 | RefSeq:NP_178341.1 |
| PFAM:PF00646 | PFAM:PF14299 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | InterPro:PP2-like | PFscan:PS50181 | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 |
| UniProt:Q9ZVQ6 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI00000A3A57 | : | : |
Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
Coordinates
chr2:-:619323..620793
Molecular Weight (calculated)
31295.7 Da
IEP (calculated)
8.549
GRAVY (calculated)
-0.339
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.