Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73584 | Canola | cytosol | 82.67 | 85.52 |
| Bra006966.1-P | Field mustard | cytosol | 84.67 | 84.39 |
| CDX78140 | Canola | cytosol | 84.33 | 84.05 |
| VIT_08s0007g04190.t01 | Wine grape | cytosol | 77.33 | 77.59 |
| KRH67813 | Soybean | cytosol | 72.33 | 73.56 |
| KRH20009 | Soybean | cytosol, plastid | 72.67 | 73.15 |
| KRH32630 | Soybean | cytosol, plastid | 72.67 | 72.67 |
| PGSC0003DMT400072413 | Potato | cytosol | 66.33 | 68.15 |
| PGSC0003DMT400028899 | Potato | cytosol | 66.67 | 68.03 |
| GSMUA_Achr6P17110_001 | Banana | cytosol, nucleus, peroxisome | 67.0 | 67.91 |
| PGSC0003DMT400006947 | Potato | cytosol | 67.67 | 67.89 |
| Solyc09g008820.2.1 | Tomato | cytosol | 66.0 | 66.22 |
| Solyc10g083730.1.1 | Tomato | cytosol | 65.33 | 65.55 |
| Solyc10g085490.1.1 | Tomato | cytosol | 65.33 | 65.55 |
| AT3G61060.2 | Thale cress | cytosol | 48.33 | 49.83 |
| AT1G63090.1 | Thale cress | cytosol | 47.67 | 49.48 |
| AT5G52120.1 | Thale cress | cytosol | 44.67 | 46.05 |
| AT1G12710.2 | Thale cress | cytosol | 51.0 | 45.95 |
| AT2G02360.1 | Thale cress | nucleus | 26.33 | 29.04 |
| AT1G80110.1 | Thale cress | cytosol | 23.0 | 26.85 |
| AT5G24560.1 | Thale cress | cytosol | 17.0 | 26.15 |
| AT2G02240.1 | Thale cress | cytosol | 26.67 | 25.0 |
| AT1G09155.1 | Thale cress | cytosol | 24.0 | 24.91 |
| AT2G02340.1 | Thale cress | cytosol | 25.0 | 24.59 |
| AT1G56240.1 | Thale cress | cytosol | 23.0 | 24.3 |
| AT2G02250.1 | Thale cress | cytosol | 25.0 | 24.19 |
| AT2G02300.1 | Thale cress | cytosol | 22.67 | 23.94 |
| AT1G56250.1 | Thale cress | cytosol | 22.0 | 23.4 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 22.33 | 22.79 |
| AT2G02230.1 | Thale cress | cytosol | 25.33 | 22.62 |
| AT2G02310.1 | Thale cress | cytosol | 22.67 | 22.15 |
| AT2G02320.1 | Thale cress | mitochondrion | 21.67 | 21.17 |
Protein Annotations
| MapMan:19.2.2.8.1.4.6 | EntrezGene:824466 | ProteinID:AEE79024.1 | ArrayExpress:AT3G53000 | EnsemblPlantsGene:AT3G53000 | RefSeq:AT3G53000 |
| TAIR:AT3G53000 | RefSeq:AT3G53000-TAIR-G | EnsemblPlants:AT3G53000.1 | TAIR:AT3G53000.1 | Symbol:AtPP2-A15 | EMBL:BX823868 |
| ProteinID:CAB86904.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0030246 | InterPro:IPR001810 | RefSeq:NP_190868.1 | PFAM:PF14299 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | InterPro:PP2-like | PFscan:PS50181 | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF7 | UniProt:Q9LF92 |
| SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI00000A5420 | : | : | : |
Description
PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
Coordinates
chr3:+:19653910..19656135
Molecular Weight (calculated)
34198.7 Da
IEP (calculated)
6.596
GRAVY (calculated)
-0.363
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.