Factsheet for Solyc10g083730.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072413	Potato	cytosol	92.31	94.52
Solyc09g008820.2.1	Tomato	cytosol	77.59	77.59
Solyc10g085490.1.1	Tomato	cytosol	74.25	74.25
VIT_08s0007g04190.t01	Wine grape	cytosol	70.9	70.9
KRH67813	Soybean	cytosol	66.89	67.8
KRH20009	Soybean	cytosol, plastid	66.56	66.78
KRH32630	Soybean	cytosol, plastid	66.89	66.67
AT3G53000.1	Thale cress	cytosol	65.55	65.33
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	63.88	64.53
CDX73584	Canola	cytosol	62.54	64.48
Bra006966.1-P	Field mustard	cytosol	63.55	63.12
CDX79690	Canola	cytosol	61.87	62.93
CDX78140	Canola	cytosol	63.21	62.79
CDX84551	Canola	cytosol	61.2	62.24
Bra023077.1-P	Field mustard	cytosol	60.54	61.56
Solyc08g080360.2.1	Tomato	plastid	48.83	50.52
Solyc12g056410.1.1	Tomato	cytosol, plastid	47.83	49.48
Solyc01g091700.2.1	Tomato	cytosol	47.16	49.13
Solyc10g017960.1.1	Tomato	cytosol	47.49	48.63
Solyc03g026160.2.1	Tomato	cytosol, extracellular	22.07	43.42
Solyc01g100010.2.1	Tomato	cytosol	22.74	24.46
Solyc01g100000.2.1	Tomato	cytosol	22.07	24.35
Solyc05g055870.2.1	Tomato	cytosol	24.75	24.03
Solyc04g050990.2.1	Tomato	cytosol	23.41	23.57
Solyc11g006740.1.1	Tomato	cytosol	14.38	23.12
Solyc12g044930.1.1	Tomato	cytosol	20.07	22.9
Solyc12g098190.1.1	Tomato	cytosol	19.73	22.61
Solyc01g099990.2.1	Tomato	cytosol	21.4	22.07
Solyc12g098200.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular	18.73	21.05
Solyc04g056680.1.1	Tomato	cytosol	10.7	17.98
Solyc10g051160.1.1	Tomato	cytosol	15.72	17.41
Solyc12g096890.1.1	Tomato	cytosol	9.03	16.88
Solyc05g053620.2.1	Tomato	cytosol	8.36	15.15

Protein Annotations

EnsemblPlants:Solyc10g083730.1.1	EnsemblPlantsGene:Solyc10g083730.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF7	PFAM:PF14299
PFscan:PS50181	SEG:seg	SUPFAM:SSF81383	UniParc:UPI0002769F35	UniProt:K4D3F9	MapMan:19.2.2.8.1.4.6

Description

No Description!

Coordinates

chr10:+:63500161..63503028

Molecular Weight (calculated)

33984.4 Da

IEP (calculated)

8.409

GRAVY (calculated)

-0.331

Length

299 amino acids

Sequence
(BLAST)

001: MGASLSNTAE NGTVTGKTGL GDIPESCVAC VFMYLTPPEI CNLARLNRAF SGAASSDAVW ESKLPSNYHH MLDLLPPWRY EGLSKKSIFA LLSRPFSFDE
101: DNKDVWLDKI SGRICMSISS KAMSITSSED RRHWNWFATD ESRFQVVAYC QQVWWFEVSG TVKFPFPPDI YTLTFRIHIG KFLKRLGRRV SNFEHTHGWD
201: LGPVRYELST SDGQCAVSEC RLHDIEQDDA KGTVKRGCWI EYKVGEFIVS RSNPVTEVRF SMKQIDCTHS KGGLCFDSVS IIPSNLRRRR KTGSFTKYL

Best Arabidopsis Sequence Match ( AT3G53000.1 )
(BLAST)

001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA

Arabidopsis Description

PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.