Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083888 | Potato | cytosol | 87.02 | 86.36 |
| Solyc12g098200.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular | 78.24 | 77.07 |
| Solyc12g098190.1.1 | Tomato | cytosol | 61.83 | 62.07 |
| Solyc12g096890.1.1 | Tomato | cytosol | 35.88 | 58.75 |
| Solyc04g056680.1.1 | Tomato | cytosol | 37.4 | 55.06 |
| Solyc04g050990.2.1 | Tomato | cytosol | 44.66 | 39.39 |
| Solyc11g006740.1.1 | Tomato | cytosol | 27.86 | 39.25 |
| VIT_05s0051g00080.t01 | Wine grape | cytosol | 38.93 | 38.64 |
| Solyc01g099990.2.1 | Tomato | cytosol | 42.75 | 38.62 |
| Solyc05g055870.2.1 | Tomato | cytosol | 44.27 | 37.66 |
| Solyc01g100000.2.1 | Tomato | cytosol | 38.17 | 36.9 |
| Solyc01g100010.2.1 | Tomato | cytosol | 38.93 | 36.69 |
| Solyc05g053620.2.1 | Tomato | cytosol | 20.61 | 32.73 |
| Solyc10g051160.1.1 | Tomato | cytosol | 30.92 | 30.0 |
| Solyc08g080360.2.1 | Tomato | plastid | 25.57 | 23.18 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 25.19 | 22.84 |
| Solyc01g091700.2.1 | Tomato | cytosol | 24.81 | 22.65 |
| Solyc10g085490.1.1 | Tomato | cytosol | 24.81 | 21.74 |
| Solyc10g017960.1.1 | Tomato | cytosol | 23.28 | 20.89 |
| Solyc09g008820.2.1 | Tomato | cytosol | 23.66 | 20.74 |
| Solyc10g083730.1.1 | Tomato | cytosol | 22.9 | 20.07 |
| Solyc03g026160.2.1 | Tomato | cytosol, extracellular | 8.78 | 15.13 |
Protein Annotations
| EnsemblPlants:Solyc12g044930.1.1 | EnsemblPlantsGene:Solyc12g044930.1 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF2 | PFAM:PF14299 | SEG:seg |
| SUPFAM:SSF81383 | UniParc:UPI000276987D | UniProt:K4DFH7 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr12:-:37593627..37594948
Molecular Weight (calculated)
29770.5 Da
IEP (calculated)
5.059
GRAVY (calculated)
-0.187
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFFRLLPEG CVSDILFFTS PKDAAISSAV SRGFNSATES DLLWGKFLPD DYEDISSRYV SPRICSSKKE LYFSLCDSPV LMDGGKLSFS LDKKTGKKCF
101: MISARELAIS WGVDTPWHWE WIAHPQSRFS EVAHLHTVCW LDIRGTIGSQ MLSKRSKYVV YLVFKLAEEH YGLDIAYASV RFVNSVSDKE AEERASILSL
201: VGENINYMTC PQKRVDGWME MELGNFINDI GDDGDVEARF MEIKHLDGKG RLIVQGIEFR PE
101: MISARELAIS WGVDTPWHWE WIAHPQSRFS EVAHLHTVCW LDIRGTIGSQ MLSKRSKYVV YLVFKLAEEH YGLDIAYASV RFVNSVSDKE AEERASILSL
201: VGENINYMTC PQKRVDGWME MELGNFINDI GDDGDVEARF MEIKHLDGKG RLIVQGIEFR PE
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Arabidopsis Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.