Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028899 | Potato | cytosol | 94.31 | 95.92 |
| Solyc09g008820.2.1 | Tomato | cytosol | 80.6 | 80.6 |
| Solyc10g083730.1.1 | Tomato | cytosol | 74.25 | 74.25 |
| VIT_08s0007g04190.t01 | Wine grape | cytosol | 69.57 | 69.57 |
| KRH67813 | Soybean | cytosol | 67.89 | 68.81 |
| KRH32630 | Soybean | cytosol, plastid | 67.56 | 67.33 |
| KRH20009 | Soybean | cytosol, plastid | 66.56 | 66.78 |
| AT3G53000.1 | Thale cress | cytosol | 65.55 | 65.33 |
| GSMUA_Achr6P17110_001 | Banana | cytosol, nucleus, peroxisome | 64.21 | 64.86 |
| CDX73584 | Canola | cytosol | 62.88 | 64.83 |
| Bra006966.1-P | Field mustard | cytosol | 63.55 | 63.12 |
| CDX78140 | Canola | cytosol | 63.21 | 62.79 |
| CDX79690 | Canola | cytosol | 61.2 | 62.24 |
| CDX84551 | Canola | cytosol | 60.87 | 61.9 |
| Bra023077.1-P | Field mustard | cytosol | 60.2 | 61.22 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 48.83 | 50.52 |
| Solyc08g080360.2.1 | Tomato | plastid | 48.16 | 49.83 |
| Solyc10g017960.1.1 | Tomato | cytosol | 47.16 | 48.29 |
| Solyc01g091700.2.1 | Tomato | cytosol | 46.15 | 48.08 |
| Solyc03g026160.2.1 | Tomato | cytosol, extracellular | 22.07 | 43.42 |
| Solyc01g100010.2.1 | Tomato | cytosol | 25.08 | 26.98 |
| Solyc01g100000.2.1 | Tomato | cytosol | 23.08 | 25.46 |
| Solyc05g055870.2.1 | Tomato | cytosol | 26.09 | 25.32 |
| Solyc04g050990.2.1 | Tomato | cytosol | 25.08 | 25.25 |
| Solyc12g044930.1.1 | Tomato | cytosol | 21.74 | 24.81 |
| Solyc11g006740.1.1 | Tomato | cytosol | 15.38 | 24.73 |
| Solyc01g099990.2.1 | Tomato | cytosol | 23.41 | 24.14 |
| Solyc12g098190.1.1 | Tomato | cytosol | 20.74 | 23.75 |
| Solyc12g098200.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular | 20.74 | 23.31 |
| Solyc12g096890.1.1 | Tomato | cytosol | 10.7 | 20.0 |
| Solyc04g056680.1.1 | Tomato | cytosol | 11.71 | 19.66 |
| Solyc10g051160.1.1 | Tomato | cytosol | 16.39 | 18.15 |
| Solyc05g053620.2.1 | Tomato | cytosol | 9.03 | 16.36 |
Protein Annotations
| EnsemblPlants:Solyc10g085490.1.1 | EnsemblPlantsGene:Solyc10g085490.1 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF7 |
| PFAM:PF14299 | PFscan:PS50181 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI000276A8C0 | UniProt:K4D3Y3 |
| MapMan:19.2.2.8.1.4.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:64643337..64646939
Molecular Weight (calculated)
33458.7 Da
IEP (calculated)
6.770
GRAVY (calculated)
-0.227
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASLSNLTE NGSANGRPGL GDIPENCVAC VFMYLNPPEI CNLARLNRAF RGAASSDAVW ESKLPSNYHL LLDLLPPQNF DGLSKKDIFA FLARSVPFDD
101: GNKEVWLDRI SGKICMSISS KALLITNVED RRHWNWFPTE ESRFHAVAYC QQVWWFELSG AVSFPFPPGI YTVTFRVHLG KIFKRLGRRA CNFEHTHGWD
201: LGPVRYELST SDGQHTVNEC FIDDAGQDDP IGNIRRGSWI EYKVGEFIVS TSDPVTEVRF SMKQIDCTHS KGGLCVDSVS ITPSDLKVHP RKGVCLLSP
101: GNKEVWLDRI SGKICMSISS KALLITNVED RRHWNWFPTE ESRFHAVAYC QQVWWFELSG AVSFPFPPGI YTVTFRVHLG KIFKRLGRRA CNFEHTHGWD
201: LGPVRYELST SDGQHTVNEC FIDDAGQDDP IGNIRRGSWI EYKVGEFIVS TSDPVTEVRF SMKQIDCTHS KGGLCVDSVS ITPSDLKVHP RKGVCLLSP
001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
Arabidopsis Description
PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.