Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006966.1-P | Field mustard | cytosol | 99.67 | 99.67 |
| CDX73584 | Canola | cytosol | 94.02 | 97.59 |
| AT3G53000.1 | Thale cress | cytosol | 84.05 | 84.33 |
| CDX79690 | Canola | cytosol | 74.42 | 76.19 |
| CDX84551 | Canola | cytosol | 73.42 | 75.17 |
| VIT_08s0007g04190.t01 | Wine grape | cytosol | 72.09 | 72.58 |
| KRH67813 | Soybean | cytosol | 68.44 | 69.83 |
| KRH20009 | Soybean | cytosol, plastid | 69.1 | 69.8 |
| KRH32630 | Soybean | cytosol, plastid | 68.77 | 69.0 |
| GSMUA_Achr6P17110_001 | Banana | cytosol, nucleus, peroxisome | 65.45 | 66.55 |
| PGSC0003DMT400028899 | Potato | cytosol | 63.79 | 65.31 |
| PGSC0003DMT400006947 | Potato | cytosol | 64.45 | 64.88 |
| PGSC0003DMT400072413 | Potato | cytosol | 62.79 | 64.73 |
| Solyc09g008820.2.1 | Tomato | cytosol | 63.12 | 63.55 |
| Solyc10g085490.1.1 | Tomato | cytosol | 62.79 | 63.21 |
| Solyc10g083730.1.1 | Tomato | cytosol | 62.79 | 63.21 |
| CDY57080 | Canola | cytosol | 50.5 | 53.9 |
| CDX98047 | Canola | cytosol | 51.16 | 53.66 |
| CDX89095 | Canola | cytosol | 49.17 | 51.75 |
| CDY42484 | Canola | cytosol | 48.84 | 51.58 |
| CDY47354 | Canola | cytosol | 47.84 | 49.66 |
| CDY63226 | Canola | plastid | 47.51 | 49.31 |
| CDY49201 | Canola | cytosol | 47.51 | 49.31 |
| CDY45973 | Canola | cytosol | 47.18 | 48.97 |
| CDY16361 | Canola | extracellular | 30.9 | 48.44 |
| CDY38901 | Canola | cytosol | 44.52 | 48.2 |
| CDY32595 | Canola | cytosol | 45.18 | 47.06 |
| CDY09378 | Canola | cytosol | 26.25 | 29.26 |
| CDY24793 | Canola | cytosol | 13.95 | 28.97 |
| CDY17599 | Canola | cytosol | 26.25 | 27.92 |
| CDY03057 | Canola | cytosol | 21.93 | 27.85 |
| CDY70803 | Canola | cytosol | 23.92 | 27.07 |
| CDY09382 | Canola | cytosol | 23.92 | 27.07 |
| CDY65051 | Canola | cytosol | 20.27 | 26.99 |
| CDY39994 | Canola | cytosol | 22.92 | 26.95 |
| CDY63170 | Canola | cytosol | 22.26 | 26.91 |
| CDY17600 | Canola | cytosol | 25.25 | 26.57 |
| CDX95006 | Canola | cytosol | 24.25 | 26.26 |
| CDX88110 | Canola | cytosol | 10.63 | 26.23 |
| CDX87293 | Canola | cytosol | 22.26 | 26.17 |
| CDY31110 | Canola | plastid | 23.26 | 25.93 |
| CDY71953 | Canola | cytosol | 23.92 | 25.9 |
| CDY17605 | Canola | cytosol | 25.25 | 25.85 |
| CDY03058 | Canola | cytosol | 24.25 | 25.52 |
| CDY03056 | Canola | cytosol | 13.29 | 25.48 |
| CDY09379 | Canola | cytosol | 20.93 | 25.4 |
| CDY72024 | Canola | plastid | 22.92 | 25.37 |
| CDY09376 | Canola | cytosol | 16.28 | 25.26 |
| CDY38992 | Canola | cytosol | 23.26 | 24.73 |
| CDY09383 | Canola | cytosol | 24.92 | 24.67 |
| CDY54100 | Canola | cytosol | 22.92 | 24.38 |
| CDY17601 | Canola | cytosol | 23.26 | 23.73 |
| CDY09380 | Canola | cytosol | 24.92 | 23.66 |
| CDY03062 | Canola | cytosol | 24.92 | 23.51 |
| CDY03060 | Canola | cytosol | 24.92 | 23.29 |
| CDY15823 | Canola | cytosol | 25.58 | 23.19 |
| CDY17602 | Canola | cytosol | 23.92 | 23.08 |
| CDY09375 | Canola | cytosol | 21.59 | 22.26 |
| CDY68805 | Canola | cytosol | 12.62 | 21.97 |
| CDY03059 | Canola | cytosol | 22.92 | 20.72 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 13.95 | 19.44 |
| CDY62670 | Canola | cytosol | 1.66 | 17.24 |
| CDY65052 | Canola | cytosol | 24.25 | 16.9 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 16.28 | 15.17 |
Protein Annotations
| EnsemblPlants:CDX78140 | EnsemblPlantsGene:GSBRNA2T00129441001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF7 | PFAM:PF14299 |
| PFscan:PS50181 | ProteinID:CDX78140 | ProteinID:CDX78140.1 | SUPFAM:SSF81383 | UniParc:UPI0004EE7794 | MapMan:19.2.2.8.1.4.6 |
Description
BnaA09g33350D
Coordinates
chrLK031814:+:1365804..1367325
Molecular Weight (calculated)
33924.1 Da
IEP (calculated)
6.237
GRAVY (calculated)
-0.347
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSLSNLND GATNDSSTGP SLGDIPESCI AAVFMNLTPP EICNLAGLNR SFRGAASSDF VWEKKLPPNY QDLLDLLPPE RVLGLSKKDI FAVLSRPIPF
101: DDDNKELWID RVTGRVCMAV SARGMAITGI EDRRYWNWIP TNESRFHVVA YLQQIWWFEV DGTVTFHLPP GIYSLSFRIH LGGFGKKSGR RVCNYEHTHG
201: WDLKPVRFSL STSDGQEASC EYYLDDVKRE EAHGHHKRGF WIDYKVGEFV VTGSEPSTEI KWSMKQIDCT HSKGGLCVDS VFINPIGDLK DYRTKSFCEI
301: S
101: DDDNKELWID RVTGRVCMAV SARGMAITGI EDRRYWNWIP TNESRFHVVA YLQQIWWFEV DGTVTFHLPP GIYSLSFRIH LGGFGKKSGR RVCNYEHTHG
201: WDLKPVRFSL STSDGQEASC EYYLDDVKRE EAHGHHKRGF WIDYKVGEFV VTGSEPSTEI KWSMKQIDCT HSKGGLCVDS VFINPIGDLK DYRTKSFCEI
301: S
001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
Arabidopsis Description
PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.