Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63170 | Canola | cytosol | 82.96 | 89.96 |
| Bra026604.1-P | Field mustard | cytosol | 84.81 | 71.12 |
| CDY09382 | Canola | cytosol | 68.15 | 69.17 |
| CDY70803 | Canola | cytosol | 66.67 | 67.67 |
| CDY17600 | Canola | cytosol | 69.63 | 65.73 |
| CDY03058 | Canola | cytosol | 68.89 | 65.03 |
| CDY65051 | Canola | cytosol | 52.22 | 62.39 |
| CDY09379 | Canola | cytosol | 54.81 | 59.68 |
| CDY24793 | Canola | cytosol | 31.48 | 58.62 |
| AT2G02250.1 | Thale cress | cytosol | 67.04 | 58.39 |
| CDY17599 | Canola | cytosol | 58.15 | 55.48 |
| CDY09380 | Canola | cytosol | 64.44 | 54.89 |
| CDY09376 | Canola | cytosol | 38.52 | 53.61 |
| CDY03057 | Canola | cytosol | 46.67 | 53.16 |
| CDY03056 | Canola | cytosol | 30.0 | 51.59 |
| CDY09375 | Canola | cytosol | 55.56 | 51.37 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 46.67 | 45.49 |
| CDY68805 | Canola | cytosol | 28.89 | 45.09 |
| CDY17605 | Canola | cytosol | 48.89 | 44.9 |
| CDY17601 | Canola | cytosol | 48.15 | 44.07 |
| CDY09383 | Canola | cytosol | 47.78 | 42.43 |
| CDY03062 | Canola | cytosol | 50.0 | 42.32 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 46.67 | 41.18 |
| CDY17602 | Canola | cytosol | 47.04 | 40.71 |
| CDX87293 | Canola | cytosol | 38.52 | 40.62 |
| CDY39994 | Canola | cytosol | 38.52 | 40.62 |
| KRG92586 | Soybean | cytosol, plastid | 45.56 | 40.59 |
| Solyc04g050990.2.1 | Tomato | cytosol | 44.44 | 40.4 |
| CDY65052 | Canola | cytosol | 64.44 | 40.28 |
| CDY15823 | Canola | cytosol | 49.26 | 40.06 |
| PGSC0003DMT400031292 | Potato | cytosol | 43.7 | 39.73 |
| CDY03060 | Canola | cytosol | 47.04 | 39.44 |
| CDY03059 | Canola | cytosol | 48.15 | 39.04 |
| Solyc05g055870.2.1 | Tomato | cytosol | 44.07 | 38.64 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 40.37 | 37.98 |
| CDY62670 | Canola | cytosol | 4.07 | 37.93 |
| KRH68844 | Soybean | cytosol | 44.44 | 37.85 |
| PGSC0003DMT400060018 | Potato | cytosol | 43.7 | 37.7 |
| CDY31110 | Canola | plastid | 37.04 | 37.04 |
| CDX88110 | Canola | cytosol | 16.3 | 36.07 |
| CDY72024 | Canola | plastid | 36.3 | 36.03 |
| CDY71953 | Canola | cytosol | 37.04 | 35.97 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 46.3 | 35.82 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 43.7 | 35.01 |
| CDX95006 | Canola | cytosol | 35.93 | 34.89 |
| CDY38992 | Canola | cytosol | 35.93 | 34.28 |
| CDY54100 | Canola | cytosol | 35.56 | 33.92 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 22.22 | 27.78 |
| CDY38901 | Canola | cytosol | 27.41 | 26.62 |
| CDX78140 | Canola | cytosol | 29.26 | 26.25 |
| CDY57080 | Canola | cytosol | 27.41 | 26.24 |
| CDX73584 | Canola | cytosol | 28.15 | 26.21 |
| CDY32595 | Canola | cytosol | 27.78 | 25.95 |
| CDX89095 | Canola | cytosol | 27.41 | 25.87 |
| CDX79690 | Canola | cytosol | 28.15 | 25.85 |
| CDX84551 | Canola | cytosol | 27.78 | 25.51 |
| CDX98047 | Canola | cytosol | 27.04 | 25.44 |
| CDY45973 | Canola | cytosol | 27.04 | 25.17 |
| CDY63226 | Canola | plastid | 27.04 | 25.17 |
| CDY42484 | Canola | cytosol | 26.3 | 24.91 |
| CDY47354 | Canola | cytosol | 25.93 | 24.14 |
| CDY49201 | Canola | cytosol | 25.93 | 24.14 |
| CDY16361 | Canola | extracellular | 16.3 | 22.92 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 21.48 | 17.96 |
Protein Annotations
| EnsemblPlants:CDY09378 | EnsemblPlantsGene:GSBRNA2T00030852001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | ProteinID:CDY09378 | ProteinID:CDY09378.1 | SMART:SM00256 |
| SUPFAM:SSF81383 | UniParc:UPI0004EE9AB9 | UniProt:A0A078FBR8 | MapMan:35.1 | : | : |
Description
BnaA02g26320DBnaA02g26320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBR8]
Coordinates
chrLK031995:+:357721..358973
Molecular Weight (calculated)
30181.3 Da
IEP (calculated)
5.052
GRAVY (calculated)
-0.110
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQKSSVESK VEGRGGIVTG PSPFDDLPVE CISNIISFTS PRDACVVASV SKTFGSAVQS DSVWEKFLPL GYASMIPQPP AFSTKELYFA LCDHFLIEDG
101: KKSFWLDKAG GKKCIMVSAN ELAITWGNSP QHWQWISIPE SRFEKVAELL SVWWFEIRGK MNTRLLSLGT RYSAYIVFKT VNKCPGLADL PVEVGVGLVG
201: QEIPKQLIYF DGDVMKPKKR EDGWMEAELG EFFNEEGCNE IELSVIEIKS PYWKCGLIIQ GIEFRPTTSR
101: KKSFWLDKAG GKKCIMVSAN ELAITWGNSP QHWQWISIPE SRFEKVAELL SVWWFEIRGK MNTRLLSLGT RYSAYIVFKT VNKCPGLADL PVEVGVGLVG
201: QEIPKQLIYF DGDVMKPKKR EDGWMEAELG EFFNEEGCNE IELSVIEIKS PYWKCGLIIQ GIEFRPTTSR
001: MGQKLGVDSR QKIRQVLGSS SKVQKHDVES IGGGGGEIVP GHSPFDDLPE DCISNIISFT SPRDVCVSAS VSKSFAHAVQ CDSIWEKFLP SEYESLIPPW
101: RVFSSKKDLY FTLCYDPVLV EDGKKSFWLE TASGKKCVLL AAKELWITGG NNPEYWQWIE LCESSFEKVP ELLNNRSFQM GGSMSTQILS LGTHYSVYIV
201: YKIKDERHGL RDLPIQVGVG FKGQEMPKQF ICFDESTDKT KEWPKKKLMK SKKRGDGWME AEIGDFFNDG GLMGFDEVEV SIVDVTSPNL KCGVMIEGIE
301: FRPKDCQ
101: RVFSSKKDLY FTLCYDPVLV EDGKKSFWLE TASGKKCVLL AAKELWITGG NNPEYWQWIE LCESSFEKVP ELLNNRSFQM GGSMSTQILS LGTHYSVYIV
201: YKIKDERHGL RDLPIQVGVG FKGQEMPKQF ICFDESTDKT KEWPKKKLMK SKKRGDGWME AEIGDFFNDG GLMGFDEVEV SIVDVTSPNL KCGVMIEGIE
301: FRPKDCQ
Arabidopsis Description
PP2B6Putative F-box protein PP2-B6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.