Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09378 | Canola | cytosol | 89.96 | 82.96 |
| Bra026604.1-P | Field mustard | cytosol | 82.73 | 63.98 |
| CDY09382 | Canola | cytosol | 63.86 | 59.77 |
| CDY17600 | Canola | cytosol | 67.07 | 58.39 |
| CDY70803 | Canola | cytosol | 62.25 | 58.27 |
| CDY03058 | Canola | cytosol | 66.27 | 57.69 |
| AT2G02250.1 | Thale cress | cytosol | 66.27 | 53.23 |
| CDY24793 | Canola | cytosol | 30.52 | 52.41 |
| CDY65051 | Canola | cytosol | 47.39 | 52.21 |
| CDY09379 | Canola | cytosol | 49.4 | 49.6 |
| CDY17599 | Canola | cytosol | 55.42 | 48.76 |
| CDY09380 | Canola | cytosol | 61.85 | 48.58 |
| CDY03056 | Canola | cytosol | 30.52 | 48.41 |
| CDY03057 | Canola | cytosol | 43.78 | 45.99 |
| CDY09375 | Canola | cytosol | 53.41 | 45.55 |
| CDY09376 | Canola | cytosol | 34.94 | 44.85 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 45.38 | 40.79 |
| CDY17605 | Canola | cytosol | 46.18 | 39.12 |
| CDY17601 | Canola | cytosol | 45.78 | 38.64 |
| CDY62670 | Canola | cytosol | 4.42 | 37.93 |
| CDY09383 | Canola | cytosol | 46.18 | 37.83 |
| Solyc04g050990.2.1 | Tomato | cytosol | 44.18 | 37.04 |
| CDY68805 | Canola | cytosol | 25.7 | 36.99 |
| CDY03062 | Canola | cytosol | 47.39 | 36.99 |
| KRG92586 | Soybean | cytosol, plastid | 44.58 | 36.63 |
| PGSC0003DMT400031292 | Potato | cytosol | 43.37 | 36.36 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 44.58 | 36.27 |
| CDY17602 | Canola | cytosol | 44.58 | 35.58 |
| CDY65052 | Canola | cytosol | 61.45 | 35.42 |
| Solyc05g055870.2.1 | Tomato | cytosol | 43.78 | 35.39 |
| CDY15823 | Canola | cytosol | 46.99 | 35.24 |
| CDX87293 | Canola | cytosol | 36.14 | 35.16 |
| CDY39994 | Canola | cytosol | 36.14 | 35.16 |
| CDY03060 | Canola | cytosol | 44.98 | 34.78 |
| PGSC0003DMT400060018 | Potato | cytosol | 43.37 | 34.5 |
| CDY03059 | Canola | cytosol | 45.78 | 34.23 |
| KRH68844 | Soybean | cytosol | 43.37 | 34.07 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 38.55 | 33.45 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 45.78 | 32.66 |
| CDY31110 | Canola | plastid | 35.34 | 32.59 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 43.37 | 32.05 |
| CDY38992 | Canola | cytosol | 36.14 | 31.8 |
| CDY54100 | Canola | cytosol | 36.14 | 31.8 |
| CDY71953 | Canola | cytosol | 35.34 | 31.65 |
| CDY72024 | Canola | plastid | 34.54 | 31.62 |
| CDX95006 | Canola | cytosol | 34.94 | 31.3 |
| CDX88110 | Canola | cytosol | 15.26 | 31.15 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 23.29 | 26.85 |
| CDY38901 | Canola | cytosol | 26.1 | 23.38 |
| CDY32595 | Canola | cytosol | 26.91 | 23.18 |
| CDY57080 | Canola | cytosol | 25.7 | 22.7 |
| CDY63226 | Canola | plastid | 26.1 | 22.41 |
| CDY45973 | Canola | cytosol | 26.1 | 22.41 |
| CDX73584 | Canola | cytosol | 26.1 | 22.41 |
| CDX78140 | Canola | cytosol | 26.91 | 22.26 |
| CDX79690 | Canola | cytosol | 26.1 | 22.11 |
| CDX98047 | Canola | cytosol | 25.3 | 21.95 |
| CDX84551 | Canola | cytosol | 25.7 | 21.77 |
| CDX89095 | Canola | cytosol | 24.9 | 21.68 |
| CDY42484 | Canola | cytosol | 24.1 | 21.05 |
| CDY49201 | Canola | cytosol | 24.5 | 21.03 |
| CDY47354 | Canola | cytosol | 24.5 | 21.03 |
| CDY16361 | Canola | extracellular | 14.06 | 18.23 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 19.68 | 15.17 |
Protein Annotations
| EnsemblPlants:CDY63170 | EnsemblPlantsGene:GSBRNA2T00037989001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | ProteinID:CDY63170 | ProteinID:CDY63170.1 | SUPFAM:SSF81383 |
| UniParc:UPI0004EED024 | UniProt:A0A078JB38 | MapMan:35.1 | : | : | : |
Description
BnaC02g47810DBnaC02g47810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB38]
Coordinates
chrLK034255:+:3721..4971
Molecular Weight (calculated)
28741.5 Da
IEP (calculated)
8.095
GRAVY (calculated)
-0.336
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQKNSVEYR VEGRGDIVTG PSPFDDLPVE CISNIISFTS PRDACVVSSV LKTFGSAVQS DSVWEKFLPL WYASMIPQPR AFSTKELYFA LCDHFLIEDG
101: KKSFWLDKSS GKNPQHWQWI SNPESRFEKV AELLSVWWFE IRGKMNTRLL SLGTRYSAYI VFKTVNKFGL VGQEIPKQLI YFDGKVRGEM RDVMKPKKRE
201: DGWMEAELGE FFNEKGCYEV ELSVIEIKSP YWKCGLIIQG IECRPTRSR
101: KKSFWLDKSS GKNPQHWQWI SNPESRFEKV AELLSVWWFE IRGKMNTRLL SLGTRYSAYI VFKTVNKFGL VGQEIPKQLI YFDGKVRGEM RDVMKPKKRE
201: DGWMEAELGE FFNEKGCYEV ELSVIEIKSP YWKCGLIIQG IECRPTRSR
001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
Arabidopsis Description
MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.