Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62670 | Canola | cytosol | 5.56 | 41.38 |
| CDX88110 | Canola | cytosol | 18.06 | 31.97 |
| CDY03056 | Canola | cytosol | 20.83 | 28.66 |
| CDY68805 | Canola | cytosol | 19.91 | 24.86 |
| CDY24793 | Canola | cytosol | 16.67 | 24.83 |
| CDY17599 | Canola | cytosol | 32.41 | 24.73 |
| Solyc04g050990.2.1 | Tomato | cytosol | 32.87 | 23.91 |
| CDY39994 | Canola | cytosol | 28.24 | 23.83 |
| CDX95006 | Canola | cytosol | 30.56 | 23.74 |
| KRH68844 | Soybean | cytosol | 34.72 | 23.66 |
| PGSC0003DMT400031292 | Potato | cytosol | 32.41 | 23.57 |
| CDX87293 | Canola | cytosol | 27.78 | 23.44 |
| KRG92586 | Soybean | cytosol, plastid | 32.87 | 23.43 |
| CDY63170 | Canola | cytosol | 26.85 | 23.29 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 29.17 | 22.74 |
| CDY71953 | Canola | cytosol | 28.7 | 22.3 |
| CDY09378 | Canola | cytosol | 27.78 | 22.22 |
| CDY31110 | Canola | plastid | 27.78 | 22.22 |
| CDY72024 | Canola | plastid | 27.78 | 22.06 |
| CDY17601 | Canola | cytosol | 30.09 | 22.03 |
| CDY17600 | Canola | cytosol | 29.17 | 22.03 |
| CDY17605 | Canola | cytosol | 29.63 | 21.77 |
| CDY03058 | Canola | cytosol | 28.7 | 21.68 |
| CDY09375 | Canola | cytosol | 29.17 | 21.58 |
| CDY09382 | Canola | cytosol | 26.39 | 21.43 |
| Solyc05g055870.2.1 | Tomato | cytosol | 30.56 | 21.43 |
| PGSC0003DMT400060018 | Potato | cytosol | 31.02 | 21.41 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 30.09 | 21.24 |
| CDY54100 | Canola | cytosol | 27.78 | 21.2 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 27.78 | 20.91 |
| CDY38992 | Canola | cytosol | 27.31 | 20.85 |
| CDY09383 | Canola | cytosol | 29.17 | 20.72 |
| CDY70803 | Canola | cytosol | 25.46 | 20.68 |
| CDY17602 | Canola | cytosol | 29.63 | 20.51 |
| CDY03060 | Canola | cytosol | 29.63 | 19.88 |
| CDY03059 | Canola | cytosol | 30.56 | 19.82 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 31.48 | 19.48 |
| CDY65051 | Canola | cytosol | 20.37 | 19.47 |
| CDY03062 | Canola | cytosol | 28.7 | 19.44 |
| CDY03057 | Canola | cytosol | 20.83 | 18.99 |
| CDY09379 | Canola | cytosol | 21.76 | 18.95 |
| CDY15823 | Canola | cytosol | 28.7 | 18.67 |
| CDY09380 | Canola | cytosol | 27.31 | 18.61 |
| CDY09376 | Canola | cytosol | 15.28 | 17.01 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 26.39 | 16.91 |
| CDX73584 | Canola | cytosol | 19.44 | 14.48 |
| CDX84551 | Canola | cytosol | 19.44 | 14.29 |
| CDX79690 | Canola | cytosol | 19.44 | 14.29 |
| CDX78140 | Canola | cytosol | 19.44 | 13.95 |
| CDY65052 | Canola | cytosol | 26.85 | 13.43 |
| CDY63226 | Canola | plastid | 15.74 | 11.72 |
| CDY49201 | Canola | cytosol | 15.28 | 11.38 |
| CDY47354 | Canola | cytosol | 15.28 | 11.38 |
| CDY45973 | Canola | cytosol | 15.28 | 11.38 |
| CDY42484 | Canola | cytosol | 13.89 | 10.53 |
| CDX89095 | Canola | cytosol | 13.89 | 10.49 |
| CDY32595 | Canola | cytosol | 13.89 | 10.38 |
| CDY57080 | Canola | cytosol | 13.43 | 10.28 |
| CDX98047 | Canola | cytosol | 13.43 | 10.1 |
| CDY38901 | Canola | cytosol | 12.96 | 10.07 |
| CDY16361 | Canola | extracellular | 8.33 | 9.38 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 12.96 | 8.67 |
Protein Annotations
| EnsemblPlants:CDX80451 | EnsemblPlantsGene:GSBRNA2T00133534001 | GO:A0A078CTG3 | InterPro:PP2-like | PANTHER:PTHR32278 | PFAM:PF14299 |
| ProteinID:CDX80451 | ProteinID:CDX80451.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE3CA9 | MapMan:35.1 |
Description
BnaC07g29930D
Coordinates
chrLK031821:+:550284..552011
Molecular Weight (calculated)
24300.5 Da
IEP (calculated)
4.474
GRAVY (calculated)
0.170
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMEMNLLDL SEECIAAVIY FTSPHDACRI SAVSKLRRSA AETPSPTPRG RNFFPLILVW WLIILCLGYL ITISSSVSVN PIFSSMMAER FEEVAALLMV
101: CWFEIRGNIS SSMLSKGTVY GAYLVFKEGE IGAFGFRSQP LETSFRYILG STRTGLCNDR RAFLESGMPE DGWLEIELGE YYVGFDEEEL VMSVLETREG
201: GWKGGIIVQE IEIRPK
101: CWFEIRGNIS SSMLSKGTVY GAYLVFKEGE IGAFGFRSQP LETSFRYILG STRTGLCNDR RAFLESGMPE DGWLEIELGE YYVGFDEEEL VMSVLETREG
201: GWKGGIIVQE IEIRPK
001: MNFLDLPEEC IATMISFTSP FDACRISAVS KLLRSAADSN TTWERFLPSD YRMYIDNSLS RFSNKQLFLR FCESPLLIED GRTSFWMEKR SGKKCWMLSA
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
Arabidopsis Description
AtPP2-B12phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.