Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024823.1-P | Field mustard | cytosol | 98.6 | 98.6 |
| CDY03058 | Canola | cytosol | 97.55 | 97.55 |
| CDY70803 | Canola | cytosol | 73.43 | 78.95 |
| CDY09382 | Canola | cytosol | 73.08 | 78.57 |
| CDY09378 | Canola | cytosol | 65.73 | 69.63 |
| CDY09380 | Canola | cytosol | 74.83 | 67.51 |
| CDY63170 | Canola | cytosol | 58.39 | 67.07 |
| AT2G02240.1 | Thale cress | cytosol | 72.03 | 64.38 |
| CDY17599 | Canola | cytosol | 59.79 | 60.42 |
| CDY03057 | Canola | cytosol | 49.65 | 59.92 |
| CDY65051 | Canola | cytosol | 47.2 | 59.73 |
| CDY09379 | Canola | cytosol | 50.7 | 58.47 |
| CDY24793 | Canola | cytosol | 29.02 | 57.24 |
| CDY03056 | Canola | cytosol | 28.32 | 51.59 |
| CDY09375 | Canola | cytosol | 52.1 | 51.03 |
| CDY65052 | Canola | cytosol | 74.48 | 49.31 |
| CDY17605 | Canola | cytosol | 50.0 | 48.64 |
| CDY17601 | Canola | cytosol | 49.65 | 48.14 |
| CDY09376 | Canola | cytosol | 32.17 | 47.42 |
| CDY09383 | Canola | cytosol | 48.25 | 45.39 |
| CDY03062 | Canola | cytosol | 50.35 | 45.14 |
| CDY15823 | Canola | cytosol | 51.75 | 44.58 |
| CDY17602 | Canola | cytosol | 48.25 | 44.23 |
| CDY03060 | Canola | cytosol | 48.95 | 43.48 |
| CDY03059 | Canola | cytosol | 48.95 | 42.04 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 40.56 | 41.88 |
| CDY68805 | Canola | cytosol | 25.17 | 41.62 |
| Solyc04g050990.2.1 | Tomato | cytosol | 42.66 | 41.08 |
| PGSC0003DMT400031292 | Potato | cytosol | 42.31 | 40.74 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 40.21 | 40.07 |
| KRG92586 | Soybean | cytosol, plastid | 42.31 | 39.93 |
| CDX88110 | Canola | cytosol | 16.43 | 38.52 |
| CDX87293 | Canola | cytosol | 34.27 | 38.28 |
| CDY39994 | Canola | cytosol | 34.27 | 38.28 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 40.91 | 38.24 |
| CDY62670 | Canola | cytosol | 3.85 | 37.93 |
| KRH68844 | Soybean | cytosol | 41.61 | 37.54 |
| Solyc05g055870.2.1 | Tomato | cytosol | 39.51 | 36.69 |
| CDY31110 | Canola | plastid | 34.62 | 36.67 |
| CDY72024 | Canola | plastid | 34.62 | 36.4 |
| CDY71953 | Canola | cytosol | 35.31 | 36.33 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 44.06 | 36.1 |
| PGSC0003DMT400060018 | Potato | cytosol | 39.51 | 36.1 |
| CDX95006 | Canola | cytosol | 34.97 | 35.97 |
| CDY38992 | Canola | cytosol | 34.27 | 34.63 |
| CDY54100 | Canola | cytosol | 34.27 | 34.63 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 39.51 | 33.53 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 22.03 | 29.17 |
| CDY32595 | Canola | cytosol | 27.27 | 26.99 |
| CDY38901 | Canola | cytosol | 26.22 | 26.98 |
| CDX89095 | Canola | cytosol | 25.87 | 25.87 |
| CDX73584 | Canola | cytosol | 26.22 | 25.86 |
| CDY42484 | Canola | cytosol | 25.52 | 25.61 |
| CDX78140 | Canola | cytosol | 26.57 | 25.25 |
| CDY57080 | Canola | cytosol | 24.48 | 24.82 |
| CDY45973 | Canola | cytosol | 24.48 | 24.14 |
| CDX98047 | Canola | cytosol | 24.13 | 24.04 |
| CDX79690 | Canola | cytosol | 24.48 | 23.81 |
| CDY63226 | Canola | plastid | 24.13 | 23.79 |
| CDX84551 | Canola | cytosol | 24.13 | 23.47 |
| CDY47354 | Canola | cytosol | 23.08 | 22.76 |
| CDY49201 | Canola | cytosol | 22.73 | 22.41 |
| CDY16361 | Canola | extracellular | 13.99 | 20.83 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 20.98 | 18.58 |
Protein Annotations
| EnsemblPlants:CDY17600 | EnsemblPlantsGene:GSBRNA2T00001804001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | ProteinID:CDY17600 | ProteinID:CDY17600.1 | SEG:seg |
| SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI0004EDE924 | UniProt:A0A078FSV6 | MapMan:35.1 | : |
Description
BnaA06g34190DBnaA06g34190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSV6]
Coordinates
chrLK032076:+:49427..50729
Molecular Weight (calculated)
32620.0 Da
IEP (calculated)
5.588
GRAVY (calculated)
-0.335
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQATMGQKQ GVESRVEDII MTGPSPFDFL PEDCISKIIS FTSPRDACVA ASVSKTFESA VKSDIVWEKF LPPEYSSLIP RSRAFSSKKE LYFVLCDYPV
101: LIEEGKKSFW LEKASGKRCI MLSSKEVWIT WGSSPQYWRW VSVPESRFEN IAELLSVCWF EIRAGMHTRY LSPGTRYSVY IVFKTEDGCP GLGDIPVEAG
201: VGLVGQESSQ KLIYFVGPSG RRRDRERRDV TRPKEREDGW MEAELGELYN ESCCDDISVS VVETKSPYWK RGLIIQGFEF RPAKTQ
101: LIEEGKKSFW LEKASGKRCI MLSSKEVWIT WGSSPQYWRW VSVPESRFEN IAELLSVCWF EIRAGMHTRY LSPGTRYSVY IVFKTEDGCP GLGDIPVEAG
201: VGLVGQESSQ KLIYFVGPSG RRRDRERRDV TRPKEREDGW MEAELGELYN ESCCDDISVS VVETKSPYWK RGLIIQGFEF RPAKTQ
001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
Arabidopsis Description
PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.