Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023077.1-P | Field mustard | cytosol | 98.98 | 98.98 |
| CDX79690 | Canola | cytosol | 98.3 | 98.3 |
| CDX73584 | Canola | cytosol | 74.49 | 75.52 |
| VIT_08s0007g04190.t01 | Wine grape | cytosol | 75.17 | 73.91 |
| CDX78140 | Canola | cytosol | 75.17 | 73.42 |
| KRH20009 | Soybean | cytosol, plastid | 72.45 | 71.48 |
| KRH32630 | Soybean | cytosol, plastid | 72.45 | 71.0 |
| KRH67813 | Soybean | cytosol | 71.09 | 70.85 |
| GSMUA_Achr6P17110_001 | Banana | cytosol, nucleus, peroxisome | 65.65 | 65.2 |
| PGSC0003DMT400006947 | Potato | cytosol | 64.63 | 63.55 |
| PGSC0003DMT400028899 | Potato | cytosol | 62.93 | 62.93 |
| PGSC0003DMT400072413 | Potato | cytosol | 62.24 | 62.67 |
| Solyc09g008820.2.1 | Tomato | cytosol | 63.61 | 62.54 |
| Solyc10g083730.1.1 | Tomato | cytosol | 62.24 | 61.2 |
| Solyc10g085490.1.1 | Tomato | cytosol | 61.9 | 60.87 |
| CDY57080 | Canola | cytosol | 48.3 | 50.35 |
| CDX89095 | Canola | cytosol | 48.64 | 50.0 |
| CDX98047 | Canola | cytosol | 48.64 | 49.83 |
| CDY42484 | Canola | cytosol | 48.3 | 49.82 |
| CDY49201 | Canola | cytosol | 46.6 | 47.24 |
| CDY47354 | Canola | cytosol | 46.6 | 47.24 |
| CDY16361 | Canola | extracellular | 30.27 | 46.35 |
| CDY63226 | Canola | plastid | 45.58 | 46.21 |
| CDY45973 | Canola | cytosol | 45.24 | 45.86 |
| CDY38901 | Canola | cytosol | 43.2 | 45.68 |
| CDY32595 | Canola | cytosol | 43.88 | 44.64 |
| CDY09378 | Canola | cytosol | 25.51 | 27.78 |
| CDX88110 | Canola | cytosol | 11.22 | 27.05 |
| CDX95006 | Canola | cytosol | 25.51 | 26.98 |
| CDY70803 | Canola | cytosol | 24.15 | 26.69 |
| CDY71953 | Canola | cytosol | 25.17 | 26.62 |
| CDY09382 | Canola | cytosol | 23.81 | 26.32 |
| CDY03057 | Canola | cytosol | 21.09 | 26.16 |
| CDY17599 | Canola | cytosol | 24.83 | 25.8 |
| CDY72024 | Canola | plastid | 23.81 | 25.74 |
| CDY63170 | Canola | cytosol | 21.77 | 25.7 |
| CDY31110 | Canola | plastid | 23.47 | 25.56 |
| CDX87293 | Canola | cytosol | 21.77 | 25.0 |
| CDY39994 | Canola | cytosol | 21.77 | 25.0 |
| CDY24793 | Canola | cytosol | 11.9 | 24.14 |
| CDY17600 | Canola | cytosol | 23.47 | 24.13 |
| CDY38992 | Canola | cytosol | 22.79 | 23.67 |
| CDY65051 | Canola | cytosol | 18.03 | 23.45 |
| CDY03058 | Canola | cytosol | 22.79 | 23.43 |
| CDY09379 | Canola | cytosol | 19.73 | 23.39 |
| CDY54100 | Canola | cytosol | 22.45 | 23.32 |
| CDY09380 | Canola | cytosol | 24.83 | 23.03 |
| CDY17605 | Canola | cytosol | 22.79 | 22.79 |
| CDY09376 | Canola | cytosol | 14.97 | 22.68 |
| CDY09383 | Canola | cytosol | 23.13 | 22.37 |
| CDY03056 | Canola | cytosol | 11.9 | 22.29 |
| CDY17601 | Canola | cytosol | 21.43 | 21.36 |
| CDY17602 | Canola | cytosol | 22.45 | 21.15 |
| CDY03062 | Canola | cytosol | 22.79 | 21.0 |
| CDY03060 | Canola | cytosol | 22.79 | 20.81 |
| CDY15823 | Canola | cytosol | 23.13 | 20.48 |
| CDY09375 | Canola | cytosol | 19.73 | 19.86 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 14.29 | 19.44 |
| CDY03059 | Canola | cytosol | 21.43 | 18.92 |
| CDY68805 | Canola | cytosol | 10.88 | 18.5 |
| CDY65052 | Canola | cytosol | 24.49 | 16.67 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 15.31 | 13.93 |
| CDY62670 | Canola | cytosol | 1.36 | 13.79 |
Protein Annotations
| EnsemblPlants:CDX84551 | EnsemblPlantsGene:GSBRNA2T00141801001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF7 | PFAM:PF14299 |
| PFscan:PS50181 | ProteinID:CDX84551 | ProteinID:CDX84551.1 | SUPFAM:SSF81383 | UniParc:UPI0004EF2E86 | MapMan:19.2.2.8.1.4.6 |
Description
BnaA03g16790D
Coordinates
chrLK031838:-:29723..31220
Molecular Weight (calculated)
33415.0 Da
IEP (calculated)
7.690
GRAVY (calculated)
-0.308
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSFSNLNG EHNGSSIGPS LGDIPESCVA CVILHLTPPE ICNLARLNRA FRGAASSDSV WERKLPSNYK DLLDLLPVER YRSLSMKGVF ALLSRPIPFD
101: DGNKEVWIDR VTGRVCMAVS AKGMAITGIE DRRYWNWIDT EESRFHVVAY LQQIWWFEVD GMVRFNLPPG IYCLSFRIHL GRFSKRLGRR VCHFEHTHGW
201: EIKPVRLSLS TSDGQEASCE YYLADKEGEQ TGRESWRDYK VGEFVVGCSE ITTEVQWSMK QIDCTHSKGG ICVDSVFIIP TDVKERNKRK AGVK
101: DGNKEVWIDR VTGRVCMAVS AKGMAITGIE DRRYWNWIDT EESRFHVVAY LQQIWWFEVD GMVRFNLPPG IYCLSFRIHL GRFSKRLGRR VCHFEHTHGW
201: EIKPVRLSLS TSDGQEASCE YYLADKEGEQ TGRESWRDYK VGEFVVGCSE ITTEVQWSMK QIDCTHSKGG ICVDSVFIIP TDVKERNKRK AGVK
001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
Arabidopsis Description
PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.