Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G24560.1 | Thale cress | cytosol | 72.95 | 45.64 |
| CDY03057 | Canola | cytosol | 37.7 | 19.41 |
| CDY09379 | Canola | cytosol | 37.7 | 18.55 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 41.8 | 18.41 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 31.97 | 18.06 |
| CDY70803 | Canola | cytosol | 39.34 | 18.05 |
| KRG92586 | Soybean | cytosol, plastid | 44.26 | 17.82 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 41.8 | 17.77 |
| CDY09382 | Canola | cytosol | 38.52 | 17.67 |
| Solyc04g050990.2.1 | Tomato | cytosol | 42.62 | 17.51 |
| PGSC0003DMT400031292 | Potato | cytosol | 41.8 | 17.17 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 42.62 | 16.99 |
| PGSC0003DMT400060018 | Potato | cytosol | 43.44 | 16.93 |
| Solyc05g055870.2.1 | Tomato | cytosol | 42.62 | 16.88 |
| CDY17599 | Canola | cytosol | 38.52 | 16.61 |
| CDY03058 | Canola | cytosol | 38.52 | 16.43 |
| CDY17600 | Canola | cytosol | 38.52 | 16.43 |
| CDX87293 | Canola | cytosol | 34.43 | 16.41 |
| CDY09378 | Canola | cytosol | 36.07 | 16.3 |
| CDY39994 | Canola | cytosol | 33.61 | 16.02 |
| CDY71953 | Canola | cytosol | 36.07 | 15.83 |
| CDY17602 | Canola | cytosol | 40.16 | 15.71 |
| CDY09380 | Canola | cytosol | 40.16 | 15.46 |
| CDY72024 | Canola | plastid | 34.43 | 15.44 |
| CDY17605 | Canola | cytosol | 36.89 | 15.31 |
| CDY63170 | Canola | cytosol | 31.15 | 15.26 |
| CDY54100 | Canola | cytosol | 35.25 | 15.19 |
| KRH68844 | Soybean | cytosol | 39.34 | 15.14 |
| CDX95006 | Canola | cytosol | 34.43 | 15.11 |
| CDY17601 | Canola | cytosol | 36.07 | 14.92 |
| CDY03060 | Canola | cytosol | 39.34 | 14.91 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 42.62 | 14.9 |
| CDY38992 | Canola | cytosol | 34.43 | 14.84 |
| CDY31110 | Canola | plastid | 32.79 | 14.81 |
| CDY09383 | Canola | cytosol | 36.89 | 14.8 |
| CDY03062 | Canola | cytosol | 37.7 | 14.42 |
| CDY03059 | Canola | cytosol | 39.34 | 14.41 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 39.34 | 14.24 |
| CDY65051 | Canola | cytosol | 26.23 | 14.16 |
| CDY09375 | Canola | cytosol | 33.61 | 14.04 |
| CDY15823 | Canola | cytosol | 37.7 | 13.86 |
| CDY38901 | Canola | cytosol | 27.87 | 12.23 |
| CDY32595 | Canola | cytosol | 28.69 | 12.11 |
| CDY42484 | Canola | cytosol | 26.23 | 11.23 |
| CDX84551 | Canola | cytosol | 27.05 | 11.22 |
| CDX79690 | Canola | cytosol | 27.05 | 11.22 |
| CDX89095 | Canola | cytosol | 26.23 | 11.19 |
| CDY65052 | Canola | cytosol | 39.34 | 11.11 |
| CDY45973 | Canola | cytosol | 26.23 | 11.03 |
| CDY63226 | Canola | plastid | 26.23 | 11.03 |
| CDY57080 | Canola | cytosol | 25.41 | 10.99 |
| CDX73584 | Canola | cytosol | 25.41 | 10.69 |
| CDY49201 | Canola | cytosol | 25.41 | 10.69 |
| CDX78140 | Canola | cytosol | 26.23 | 10.63 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 27.87 | 10.53 |
| CDX98047 | Canola | cytosol | 24.59 | 10.45 |
| CDY47354 | Canola | cytosol | 24.59 | 10.34 |
| CDY09376 | Canola | cytosol | 14.75 | 9.28 |
| CDY24793 | Canola | cytosol | 6.56 | 5.52 |
| CDY16361 | Canola | extracellular | 7.38 | 4.69 |
| CDY68805 | Canola | cytosol | 5.74 | 4.05 |
| CDY03056 | Canola | cytosol | 3.28 | 2.55 |
| CDY62670 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX88110 | EnsemblPlantsGene:GSBRNA2T00147544001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | ProteinID:CDX88110 | ProteinID:CDX88110.1 | SUPFAM:SSF81383 | UniParc:UPI0004EDB111 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA06g27010D
Coordinates
chrLK031854:+:677327..678387
Molecular Weight (calculated)
14246.4 Da
IEP (calculated)
9.746
GRAVY (calculated)
-0.233
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFLDLQEEC IATVISFTIP HNACRISPVS KLLRSAADSN AVWERFLPSD PRLVNDHSLY RVSNKQLFLR LCESPLFIDD GRTSFWMEKR SRKKCRMLSS
101: RKLEILLAIG DEVRVYKNWA LK
101: RKLEILLAIG DEVRVYKNWA LK
001: MNFLDLPEEC IATMISFTSP FDACRISAVS KLLRSAADSN TTWERFLPSD YRMYIDNSLS RFSNKQLFLR FCESPLLIED GRTSFWMEKR SGKKCWMLSA
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
101: RKLDIVWVDS PEFWIWVSIP DSRFEEVAGL LMVCWFEIRG TQESREDGWL EIELGEYYVG FDDEEIEMSV LETREGGWKG GIIVQGIEIR PKELL
Arabidopsis Description
AtPP2-B12phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.