Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03056 | Canola | cytosol | 51.72 | 9.55 |
| CDY09383 | Canola | cytosol | 100.0 | 9.54 |
| CDY15823 | Canola | cytosol | 96.55 | 8.43 |
| CDY24793 | Canola | cytosol | 37.93 | 7.59 |
| CDY68805 | Canola | cytosol | 41.38 | 6.94 |
| CDY17602 | Canola | cytosol | 65.52 | 6.09 |
| CDY03060 | Canola | cytosol | 65.52 | 5.9 |
| CDY03059 | Canola | cytosol | 65.52 | 5.71 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 41.38 | 5.56 |
| CDY17605 | Canola | cytosol | 55.17 | 5.44 |
| CDY03062 | Canola | cytosol | 58.62 | 5.33 |
| CDY17599 | Canola | cytosol | 48.28 | 4.95 |
| CDY65051 | Canola | cytosol | 37.93 | 4.87 |
| CDY39994 | Canola | cytosol | 41.38 | 4.69 |
| CDX87293 | Canola | cytosol | 41.38 | 4.69 |
| CDY09376 | Canola | cytosol | 31.03 | 4.64 |
| CDY09382 | Canola | cytosol | 41.38 | 4.51 |
| CDY09379 | Canola | cytosol | 37.93 | 4.44 |
| CDY63170 | Canola | cytosol | 37.93 | 4.42 |
| CDY17601 | Canola | cytosol | 44.83 | 4.41 |
| KRH33867 | Soybean | cytosol | 37.93 | 4.17 |
| CDY70803 | Canola | cytosol | 37.93 | 4.14 |
| CDY09375 | Canola | cytosol | 41.38 | 4.11 |
| CDY09378 | Canola | cytosol | 37.93 | 4.07 |
| CDX95006 | Canola | cytosol | 37.93 | 3.96 |
| CDY03058 | Canola | cytosol | 37.93 | 3.85 |
| CDY17600 | Canola | cytosol | 37.93 | 3.85 |
| CDY09380 | Canola | cytosol | 41.38 | 3.79 |
| CDY31110 | Canola | plastid | 34.48 | 3.7 |
| Solyc01g100000.2.1 | Tomato | cytosol | 34.48 | 3.69 |
| CDY72024 | Canola | plastid | 34.48 | 3.68 |
| CDY71953 | Canola | cytosol | 34.48 | 3.6 |
| PGSC0003DMT400063744 | Potato | cytosol | 34.48 | 3.55 |
| CDY38992 | Canola | cytosol | 34.48 | 3.53 |
| CDY54100 | Canola | cytosol | 34.48 | 3.53 |
| KRG96762 | Soybean | cytosol | 34.48 | 3.48 |
| KRH68480 | Soybean | cytosol | 34.48 | 3.48 |
| Solyc01g100010.2.1 | Tomato | cytosol | 31.03 | 3.24 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 31.03 | 3.16 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 31.03 | 3.12 |
| CDY65052 | Canola | cytosol | 41.38 | 2.78 |
| CDY16361 | Canola | extracellular | 13.79 | 2.08 |
| CDY42484 | Canola | cytosol | 17.24 | 1.75 |
| CDX89095 | Canola | cytosol | 17.24 | 1.75 |
| CDY32595 | Canola | cytosol | 17.24 | 1.73 |
| CDX73584 | Canola | cytosol | 17.24 | 1.72 |
| CDX78140 | Canola | cytosol | 17.24 | 1.66 |
| CDY38901 | Canola | cytosol | 13.79 | 1.44 |
| CDY57080 | Canola | cytosol | 13.79 | 1.42 |
| CDX98047 | Canola | cytosol | 13.79 | 1.39 |
| CDY49201 | Canola | cytosol | 13.79 | 1.38 |
| CDY63226 | Canola | plastid | 13.79 | 1.38 |
| CDY45973 | Canola | cytosol | 13.79 | 1.38 |
| CDY47354 | Canola | cytosol | 13.79 | 1.38 |
| CDX84551 | Canola | cytosol | 13.79 | 1.36 |
| CDX79690 | Canola | cytosol | 13.79 | 1.36 |
| CDY03057 | Canola | cytosol | 6.9 | 0.84 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 0.0 | 0.0 |
| CDX88110 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY62670 | EnsemblPlantsGene:GSBRNA2T00037482001 | ProteinID:CDY62670 | ProteinID:CDY62670.1 | UniParc:UPI0004EEA582 | UniProt:A0A078JCX9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng40760DBnaCnng40760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCX9]
Coordinates
chrLK034177:+:23521..23610
Molecular Weight (calculated)
3407.2 Da
IEP (calculated)
6.711
GRAVY (calculated)
-0.659
Length
29 amino acids
Sequence
(BLAST)
(BLAST)
1: METRMGQWKS GLVFQGIEIR PVKEEEVTK
001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
Arabidopsis Description
PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.