Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31110 | Canola | plastid | 29.72 | 35.56 |
| CDY72024 | Canola | plastid | 29.72 | 35.29 |
| CDX95006 | Canola | cytosol | 30.03 | 34.89 |
| CDY71953 | Canola | cytosol | 30.03 | 34.89 |
| CDY38992 | Canola | cytosol | 26.93 | 30.74 |
| CDY54100 | Canola | cytosol | 26.63 | 30.39 |
| CDX88110 | Canola | cytosol | 10.53 | 27.87 |
| CDY03057 | Canola | cytosol | 19.81 | 27.0 |
| KRH33867 | Soybean | cytosol | 19.5 | 23.86 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 20.74 | 23.51 |
| CDY09379 | Canola | cytosol | 17.96 | 23.39 |
| CDY09382 | Canola | cytosol | 19.2 | 23.31 |
| CDY17599 | Canola | cytosol | 19.81 | 22.61 |
| CDY70803 | Canola | cytosol | 18.58 | 22.56 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 19.81 | 22.22 |
| CDY17602 | Canola | cytosol | 21.36 | 22.12 |
| CDY17601 | Canola | cytosol | 20.12 | 22.03 |
| PGSC0003DMT400063744 | Potato | cytosol | 19.2 | 21.99 |
| Solyc01g100010.2.1 | Tomato | cytosol | 18.89 | 21.94 |
| CDY65051 | Canola | cytosol | 15.17 | 21.68 |
| CDY09378 | Canola | cytosol | 17.96 | 21.48 |
| CDY03058 | Canola | cytosol | 18.89 | 21.33 |
| KRH68480 | Soybean | cytosol | 18.89 | 21.25 |
| CDY17605 | Canola | cytosol | 19.2 | 21.09 |
| Solyc01g100000.2.1 | Tomato | cytosol | 17.65 | 21.03 |
| CDY17600 | Canola | cytosol | 18.58 | 20.98 |
| CDY03060 | Canola | cytosol | 20.74 | 20.81 |
| CDY09383 | Canola | cytosol | 19.5 | 20.72 |
| CDX87293 | Canola | cytosol | 16.41 | 20.7 |
| CDY39994 | Canola | cytosol | 16.1 | 20.31 |
| KRG96762 | Soybean | cytosol | 17.96 | 20.21 |
| CDY03062 | Canola | cytosol | 19.81 | 20.06 |
| CDY63170 | Canola | cytosol | 15.17 | 19.68 |
| CDY09380 | Canola | cytosol | 19.2 | 19.56 |
| CDY15823 | Canola | cytosol | 19.81 | 19.28 |
| CDY03059 | Canola | cytosol | 19.5 | 18.92 |
| CDY09375 | Canola | cytosol | 17.03 | 18.84 |
| CDY24793 | Canola | cytosol | 8.05 | 17.93 |
| CDX73584 | Canola | cytosol | 14.86 | 16.55 |
| CDY09376 | Canola | cytosol | 9.91 | 16.49 |
| CDX78140 | Canola | cytosol | 15.17 | 16.28 |
| CDY38901 | Canola | cytosol | 13.62 | 15.83 |
| CDY42484 | Canola | cytosol | 13.93 | 15.79 |
| CDX98047 | Canola | cytosol | 13.93 | 15.68 |
| CDX79690 | Canola | cytosol | 14.24 | 15.65 |
| CDY57080 | Canola | cytosol | 13.62 | 15.6 |
| CDX89095 | Canola | cytosol | 13.62 | 15.38 |
| CDX84551 | Canola | cytosol | 13.93 | 15.31 |
| CDY03056 | Canola | cytosol | 7.43 | 15.29 |
| CDY32595 | Canola | cytosol | 13.62 | 15.22 |
| CDY65052 | Canola | cytosol | 18.89 | 14.12 |
| CDY68805 | Canola | cytosol | 7.43 | 13.87 |
| CDY47354 | Canola | cytosol | 12.38 | 13.79 |
| CDY45973 | Canola | cytosol | 12.07 | 13.45 |
| CDY63226 | Canola | plastid | 12.07 | 13.45 |
| CDY49201 | Canola | cytosol | 12.07 | 13.45 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 8.67 | 12.96 |
| CDY16361 | Canola | extracellular | 6.19 | 10.42 |
| CDY62670 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX95004 | EnsemblPlantsGene:GSBRNA2T00100515001 | GO:A0A078E343 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF15 |
| PFAM:PF14299 | ProteinID:CDX95004 | ProteinID:CDX95004.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE4F23 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g06670D
Coordinates
chrLK031886:+:637487..641489
Molecular Weight (calculated)
36755.0 Da
IEP (calculated)
10.244
GRAVY (calculated)
0.273
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCSRFLDDV SLDCKNSFNA ALAENYTLSK SKNAVQNPIA SLKGWLVAYL RANKWNFVSR AATFLQSNMW TLLASLLFAI LVCQQFCGGI TFTCVGVYSA
101: LCLVARYVCW GHMMKLIFAF FFYKLVTTNS VFTAAAFSSA ATLVLIFAAI VGLVRRCFQI VMRIFRYISS AYVSSVFRVA GNSDFAWEKF IPSVYGRLIS
201: SLTHLSFSSK KEIYRCLCES ILIDNGRKIE KLTRKITYVL SARDRSITWG DQRHYWSWSH RSDSKSTLKN FKLYYKFSEG IRLIMDRLEI IGKIQTGVLS
301: PNTSYGAYLI MKVKSIWTRL STG
101: LCLVARYVCW GHMMKLIFAF FFYKLVTTNS VFTAAAFSSA ATLVLIFAAI VGLVRRCFQI VMRIFRYISS AYVSSVFRVA GNSDFAWEKF IPSVYGRLIS
201: SLTHLSFSSK KEIYRCLCES ILIDNGRKIE KLTRKITYVL SARDRSITWG DQRHYWSWSH RSDSKSTLKN FKLYYKFSEG IRLIMDRLEI IGKIQTGVLS
301: PNTSYGAYLI MKVKSIWTRL STG
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.