Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09379 | Canola | cytosol | 76.55 | 69.76 |
| Bra026605.1-P | Field mustard | cytosol | 71.68 | 62.07 |
| CDY09376 | Canola | cytosol | 53.1 | 61.86 |
| CDY24793 | Canola | cytosol | 34.51 | 53.79 |
| CDY09378 | Canola | cytosol | 62.39 | 52.22 |
| CDY03056 | Canola | cytosol | 34.07 | 49.04 |
| CDY09382 | Canola | cytosol | 56.64 | 48.12 |
| CDY03058 | Canola | cytosol | 60.18 | 47.55 |
| CDY63170 | Canola | cytosol | 52.21 | 47.39 |
| CDY70803 | Canola | cytosol | 55.75 | 47.37 |
| CDY17600 | Canola | cytosol | 59.73 | 47.2 |
| CDY68805 | Canola | cytosol | 34.96 | 45.66 |
| CDY03057 | Canola | cytosol | 47.35 | 45.15 |
| CDY17599 | Canola | cytosol | 56.19 | 44.88 |
| CDY09380 | Canola | cytosol | 58.85 | 41.96 |
| CDY09375 | Canola | cytosol | 52.65 | 40.75 |
| CDY62670 | Canola | cytosol | 4.87 | 37.93 |
| CDY17605 | Canola | cytosol | 46.46 | 35.71 |
| CDY17601 | Canola | cytosol | 45.58 | 34.92 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 42.04 | 34.3 |
| CDY09383 | Canola | cytosol | 45.58 | 33.88 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 42.48 | 33.45 |
| KRG92586 | Soybean | cytosol, plastid | 43.81 | 32.67 |
| CDY03060 | Canola | cytosol | 46.02 | 32.3 |
| CDY17602 | Canola | cytosol | 44.25 | 32.05 |
| CDY39994 | Canola | cytosol | 36.28 | 32.03 |
| CDX87293 | Canola | cytosol | 36.28 | 32.03 |
| CDY03062 | Canola | cytosol | 45.13 | 31.97 |
| PGSC0003DMT400031292 | Potato | cytosol | 41.59 | 31.65 |
| Solyc04g050990.2.1 | Tomato | cytosol | 41.59 | 31.65 |
| CDY15823 | Canola | cytosol | 46.02 | 31.33 |
| CDY65052 | Canola | cytosol | 59.29 | 31.02 |
| PGSC0003DMT400060018 | Potato | cytosol | 42.92 | 30.99 |
| Solyc05g055870.2.1 | Tomato | cytosol | 42.04 | 30.84 |
| CDY03059 | Canola | cytosol | 45.13 | 30.63 |
| KRH68844 | Soybean | cytosol | 42.48 | 30.28 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 46.02 | 29.8 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 40.27 | 29.74 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 43.36 | 29.08 |
| CDY31110 | Canola | plastid | 33.63 | 28.15 |
| CDY72024 | Canola | plastid | 33.63 | 27.94 |
| CDY71953 | Canola | cytosol | 34.07 | 27.7 |
| CDX95006 | Canola | cytosol | 32.74 | 26.62 |
| CDX88110 | Canola | cytosol | 14.16 | 26.23 |
| CDY38992 | Canola | cytosol | 32.74 | 26.15 |
| CDY54100 | Canola | cytosol | 31.86 | 25.44 |
| CDY16361 | Canola | extracellular | 19.03 | 22.4 |
| CDY57080 | Canola | cytosol | 26.55 | 21.28 |
| CDX89095 | Canola | cytosol | 26.55 | 20.98 |
| CDY32595 | Canola | cytosol | 26.11 | 20.42 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 19.47 | 20.37 |
| CDY42484 | Canola | cytosol | 25.66 | 20.35 |
| CDX73584 | Canola | cytosol | 26.11 | 20.34 |
| CDY63226 | Canola | plastid | 26.11 | 20.34 |
| CDX78140 | Canola | cytosol | 26.99 | 20.27 |
| CDY38901 | Canola | cytosol | 24.78 | 20.14 |
| CDY45973 | Canola | cytosol | 25.66 | 20.0 |
| CDX98047 | Canola | cytosol | 25.22 | 19.86 |
| CDY47354 | Canola | cytosol | 25.22 | 19.66 |
| CDY49201 | Canola | cytosol | 24.78 | 19.31 |
| CDX79690 | Canola | cytosol | 23.89 | 18.37 |
| CDX84551 | Canola | cytosol | 23.45 | 18.03 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 21.68 | 15.17 |
Protein Annotations
| EnsemblPlants:CDY65051 | EnsemblPlantsGene:GSBRNA2T00044094001 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | PFAM:PF14299 |
| ProteinID:CDY65051 | ProteinID:CDY65051.1 | SEG:seg | UniParc:UPI0004EDC360 | UniProt:A0A078JH72 | MapMan:35.1 |
Description
BnaC02g47870DBnaC02g47870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH72]
Coordinates
chrLK034642:+:7485..8696
Molecular Weight (calculated)
26170.9 Da
IEP (calculated)
7.706
GRAVY (calculated)
-0.200
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLLPPPSPL TPPPPVWEKF LPPEYSSLIL ESQVSTLKKE LYFSLCNNPV LIEDGQKSFW LEKASGKRCI MLSARQLAIT WGNSPQYWQW ISIPEARFKK
101: VPELLDVCAF EIRGWMNTRI LSPRTHYSAY VVYKTRSGCH GFRDLPIQVG ICLVGQKATK RFICFDEELM KSKEREDGWI EAEIGDLFNE IGCDEIELSI
201: IDITSPYWKR GLIIQGIEFR PVKKLW
101: VPELLDVCAF EIRGWMNTRI LSPRTHYSAY VVYKTRSGCH GFRDLPIQVG ICLVGQKATK RFICFDEELM KSKEREDGWI EAEIGDLFNE IGCDEIELSI
201: IDITSPYWKR GLIIQGIEFR PVKKLW
001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
Arabidopsis Description
MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.