Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62670 | Canola | cytosol | 9.55 | 51.72 |
| CDY68805 | Canola | cytosol | 56.69 | 51.45 |
| CDY24793 | Canola | cytosol | 43.31 | 46.9 |
| CDY17599 | Canola | cytosol | 70.7 | 39.22 |
| AT2G02360.1 | Thale cress | nucleus | 66.24 | 38.24 |
| CDY09376 | Canola | cytosol | 43.95 | 35.57 |
| CDY65051 | Canola | cytosol | 49.04 | 34.07 |
| CDY03057 | Canola | cytosol | 48.41 | 32.07 |
| CDY63170 | Canola | cytosol | 48.41 | 30.52 |
| CDY09375 | Canola | cytosol | 56.05 | 30.14 |
| CDY09378 | Canola | cytosol | 51.59 | 30.0 |
| AT2G02340.1 | Thale cress | cytosol | 57.96 | 29.84 |
| CDY09382 | Canola | cytosol | 48.41 | 28.57 |
| CDY17600 | Canola | cytosol | 51.59 | 28.32 |
| CDY03058 | Canola | cytosol | 50.96 | 27.97 |
| CDY70803 | Canola | cytosol | 46.5 | 27.44 |
| CDY09379 | Canola | cytosol | 41.4 | 26.21 |
| AT2G02320.1 | Thale cress | mitochondrion | 50.32 | 25.73 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 47.77 | 25.51 |
| CDY09380 | Canola | cytosol | 50.32 | 24.92 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 42.68 | 24.19 |
| PGSC0003DMT400031292 | Potato | cytosol | 44.59 | 23.57 |
| Solyc04g050990.2.1 | Tomato | cytosol | 44.59 | 23.57 |
| CDY17605 | Canola | cytosol | 43.31 | 23.13 |
| KRG92586 | Soybean | cytosol, plastid | 44.59 | 23.1 |
| CDY39994 | Canola | cytosol | 36.94 | 22.66 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 41.4 | 22.65 |
| CDX87293 | Canola | cytosol | 36.31 | 22.27 |
| CDY17602 | Canola | cytosol | 43.95 | 22.12 |
| Solyc05g055870.2.1 | Tomato | cytosol | 43.31 | 22.08 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 49.04 | 22.06 |
| PGSC0003DMT400060018 | Potato | cytosol | 43.95 | 22.04 |
| CDY17601 | Canola | cytosol | 41.4 | 22.03 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 42.68 | 21.9 |
| CDY15823 | Canola | cytosol | 45.22 | 21.39 |
| CDY09383 | Canola | cytosol | 41.4 | 21.38 |
| CDY03060 | Canola | cytosol | 43.31 | 21.12 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 45.22 | 21.07 |
| CDY03062 | Canola | cytosol | 42.68 | 21.0 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 28.66 | 20.83 |
| KRH68844 | Soybean | cytosol | 40.76 | 20.19 |
| CDY71953 | Canola | cytosol | 35.67 | 20.14 |
| CDY72024 | Canola | plastid | 34.39 | 19.85 |
| CDX95006 | Canola | cytosol | 35.03 | 19.78 |
| CDY31110 | Canola | plastid | 33.76 | 19.63 |
| CDY38992 | Canola | cytosol | 34.39 | 19.08 |
| CDY54100 | Canola | cytosol | 34.39 | 19.08 |
| CDY03059 | Canola | cytosol | 40.13 | 18.92 |
| CDY65052 | Canola | cytosol | 49.04 | 17.82 |
| CDY16361 | Canola | extracellular | 20.38 | 16.67 |
| CDX73584 | Canola | cytosol | 25.48 | 13.79 |
| CDX78140 | Canola | cytosol | 25.48 | 13.29 |
| CDX84551 | Canola | cytosol | 22.29 | 11.9 |
| CDX79690 | Canola | cytosol | 22.29 | 11.9 |
| CDY57080 | Canola | cytosol | 21.02 | 11.7 |
| CDY63226 | Canola | plastid | 21.02 | 11.38 |
| CDY42484 | Canola | cytosol | 20.38 | 11.23 |
| CDX89095 | Canola | cytosol | 20.38 | 11.19 |
| CDX98047 | Canola | cytosol | 20.38 | 11.15 |
| CDY32595 | Canola | cytosol | 20.38 | 11.07 |
| CDY45973 | Canola | cytosol | 20.38 | 11.03 |
| CDY47354 | Canola | cytosol | 20.38 | 11.03 |
| CDY49201 | Canola | cytosol | 20.38 | 11.03 |
| CDY38901 | Canola | cytosol | 19.11 | 10.79 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 15.29 | 7.43 |
| CDX88110 | Canola | cytosol | 2.55 | 3.28 |
Protein Annotations
| EnsemblPlants:CDY03056 | EnsemblPlantsGene:GSBRNA2T00115388001 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | PFAM:PF14299 |
| ProteinID:CDY03056 | ProteinID:CDY03056.1 | SEG:seg | UniParc:UPI0004EF0648 | MapMan:35.1 | : |
Description
BnaC07g21710D
Coordinates
chrLK031939:+:654144..654716
Molecular Weight (calculated)
18431.1 Da
IEP (calculated)
9.548
GRAVY (calculated)
-0.451
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MWGDTPQYWE WITFPEARFK RVAKLLDLCW FEIRGRTKTR VLSPRTRYSA YIVFKKVNHC NSFEDVAIEA GVGVVGNEAS TRFIYFDARV DGLSLRRRRR
101: RPHERRDGWM EIELGEFFSG GDIMNSDEIE MSALETKLGH WKSGLIIQGI EIRPVRT
101: RPHERRDGWM EIELGEFFSG GDIMNSDEIE MSALETKLGH WKSGLIIQGI EIRPVRT
001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ
Arabidopsis Description
MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.