Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98047 | Canola | cytosol | 95.39 | 93.73 |
| AT1G12710.2 | Thale cress | cytosol | 86.52 | 73.27 |
| CDY47354 | Canola | cytosol | 74.82 | 72.76 |
| CDY16361 | Canola | extracellular | 49.29 | 72.4 |
| CDY49201 | Canola | cytosol | 74.11 | 72.07 |
| CDY45973 | Canola | cytosol | 73.4 | 71.38 |
| CDY63226 | Canola | plastid | 73.4 | 71.38 |
| KRH03980 | Soybean | cytosol, plastid | 65.6 | 64.69 |
| PGSC0003DMT400058590 | Potato | plastid | 64.54 | 62.98 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 37.94 | 62.94 |
| Solyc08g080360.2.1 | Tomato | plastid | 64.18 | 62.63 |
| PGSC0003DMT400010881 | Potato | plastid | 62.06 | 60.55 |
| Solyc12g056410.1.1 | Tomato | cytosol, plastid | 62.06 | 60.55 |
| VIT_02s0025g04380.t01 | Wine grape | cytosol | 65.96 | 60.19 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 42.2 | 60.1 |
| CDY42484 | Canola | cytosol | 58.51 | 57.89 |
| CDX89095 | Canola | cytosol | 58.51 | 57.69 |
| GSMUA_Achr4P27200_001 | Banana | cytosol | 56.74 | 55.75 |
| GSMUA_Achr1P03900_001 | Banana | cytosol | 57.45 | 55.48 |
| GSMUA_Achr11P... | Banana | cytosol | 55.67 | 54.9 |
| GSMUA_Achr4P24870_001 | Banana | cytosol | 58.87 | 54.79 |
| KRH57251 | Soybean | plastid | 65.96 | 54.55 |
| GSMUA_Achr5P03300_001 | Banana | cytosol | 56.03 | 54.3 |
| Os09t0525300-01 | Rice | cytosol | 53.9 | 54.09 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 57.45 | 54.0 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 57.45 | 53.64 |
| Zm00001d029673_P001 | Maize | plasma membrane | 56.03 | 53.38 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 56.38 | 53.36 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 56.74 | 53.33 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 56.03 | 53.02 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 53.9 | 52.96 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 57.09 | 52.96 |
| Os03t0116700-01 | Rice | cytosol, extracellular | 55.67 | 52.86 |
| EER94629 | Sorghum | plasma membrane | 56.38 | 52.82 |
| Zm00001d021224_P001 | Maize | cytosol | 55.32 | 52.7 |
| Zm00001d027361_P001 | Maize | cytosol | 55.67 | 52.68 |
| EER99217 | Sorghum | cytosol | 55.67 | 52.51 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 53.55 | 52.43 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 53.19 | 52.26 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 53.19 | 52.26 |
| Os02t0675800-01 | Rice | cytosol | 54.96 | 52.19 |
| CDX73584 | Canola | cytosol | 53.55 | 52.07 |
| EER95641 | Sorghum | cytosol | 54.26 | 52.04 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 55.67 | 51.82 |
| GSMUA_Achr7P05860_001 | Banana | cytosol | 53.19 | 51.72 |
| CDY38901 | Canola | cytosol | 50.71 | 51.44 |
| GSMUA_Achr3P12400_001 | Banana | cytosol | 52.48 | 51.39 |
| Os04t0571300-01 | Rice | cytosol, mitochondrion, peroxisome | 55.32 | 51.32 |
| KXG31015 | Sorghum | cytosol | 54.61 | 51.16 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 53.55 | 50.67 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 53.55 | 50.67 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 53.55 | 50.67 |
| CDX78140 | Canola | cytosol | 53.9 | 50.5 |
| CDY32595 | Canola | cytosol | 51.42 | 50.17 |
| CDX79690 | Canola | cytosol | 51.42 | 49.32 |
| GSMUA_Achr11P... | Banana | cytosol | 31.56 | 49.17 |
| Zm00001d051447_P002 | Maize | cytosol | 51.42 | 48.99 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 53.19 | 48.86 |
| EES11284 | Sorghum | cytosol | 53.9 | 48.56 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 52.48 | 48.37 |
| CDX84551 | Canola | cytosol | 50.35 | 48.3 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 52.48 | 48.21 |
| Os10t0522400-01 | Rice | cytosol | 27.66 | 47.27 |
| Zm00001d026078_P001 | Maize | cytosol | 45.04 | 43.94 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 23.4 | 43.42 |
| Zm00001d024256_P001 | Maize | cytosol, mitochondrion | 35.82 | 40.56 |
| Zm00001d035636_P001 | Maize | plastid | 34.4 | 37.16 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 30.5 | 36.29 |
| Zm00001d021854_P001 | Maize | cytosol | 10.99 | 35.23 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 19.86 | 32.94 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 19.5 | 32.35 |
| CDY03057 | Canola | cytosol | 24.11 | 28.69 |
| CDY17599 | Canola | cytosol | 27.66 | 27.56 |
| CDY09378 | Canola | cytosol | 26.24 | 27.41 |
| CDY31110 | Canola | plastid | 26.24 | 27.41 |
| CDY72024 | Canola | plastid | 26.24 | 27.21 |
| CDY09382 | Canola | cytosol | 25.18 | 26.69 |
| CDY70803 | Canola | cytosol | 25.18 | 26.69 |
| CDX95006 | Canola | cytosol | 26.24 | 26.62 |
| CDY71953 | Canola | cytosol | 26.24 | 26.62 |
| CDY65051 | Canola | cytosol | 21.28 | 26.55 |
| CDY09379 | Canola | cytosol | 22.7 | 25.81 |
| CDY09376 | Canola | cytosol | 17.73 | 25.77 |
| CDY63170 | Canola | cytosol | 22.7 | 25.7 |
| CDX88110 | Canola | cytosol | 10.99 | 25.41 |
| CDY38992 | Canola | cytosol | 25.18 | 25.09 |
| CDY17605 | Canola | cytosol | 25.89 | 24.83 |
| CDY54100 | Canola | cytosol | 24.82 | 24.73 |
| CDY03058 | Canola | cytosol | 24.82 | 24.48 |
| CDY17600 | Canola | cytosol | 24.82 | 24.48 |
| CDX87293 | Canola | cytosol | 21.63 | 23.83 |
| CDY39994 | Canola | cytosol | 21.63 | 23.83 |
| CDY24793 | Canola | cytosol | 12.06 | 23.45 |
| CDY09375 | Canola | cytosol | 24.11 | 23.29 |
| CDY03062 | Canola | cytosol | 25.89 | 22.88 |
| CDY09380 | Canola | cytosol | 25.53 | 22.71 |
| CDY17601 | Canola | cytosol | 23.4 | 22.37 |
| CDY17602 | Canola | cytosol | 24.11 | 21.79 |
| CDY03060 | Canola | cytosol | 24.82 | 21.74 |
| CDY09383 | Canola | cytosol | 22.7 | 21.05 |
| CDY03056 | Canola | cytosol | 11.7 | 21.02 |
| CDY68805 | Canola | cytosol | 12.77 | 20.81 |
| CDY15823 | Canola | cytosol | 23.4 | 19.88 |
| CDY03059 | Canola | cytosol | 23.4 | 19.82 |
| CDY65052 | Canola | cytosol | 25.18 | 16.44 |
| CDY62670 | Canola | cytosol | 1.42 | 13.79 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 15.6 | 13.62 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 10.28 | 13.43 |
Protein Annotations
| EnsemblPlants:CDY57080 | EnsemblPlantsGene:GSBRNA2T00020538001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF2 | PFAM:PF00646 |
| PFAM:PF14299 | PFscan:PS50181 | ProteinID:CDY57080 | ProteinID:CDY57080.1 | SEG:seg | SMART:SM00256 |
| SUPFAM:SSF81383 | UniParc:UPI0004EBBEF6 | UniProt:A0A078J1J3 | MapMan:19.2.2.8.1.4.6 | : | : |
Description
BnaCnng31600DBnaCnng31600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1J3]
Coordinates
chrLK033545:-:53794..55022
Molecular Weight (calculated)
32057.8 Da
IEP (calculated)
7.425
GRAVY (calculated)
-0.363
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASHSGLHK DLSSSSSSFC LGDLPEDCVA LIVENLDPVE ICRLSKLNRA FRGASWADFV WESKLPPNYE AFLERILGGG FPENLQKRDL YACLCRVNSF
101: DHGTKKVWID KRSGGVCLSI SAKGLSITGI DDRRYWSHIP TDESRFASVA YLQQTWWFEV DGEIDFPFPV GTYSIFFRLQ LGQSGKWFGR RVCNTEQVHG
201: WDIKPVRFQL WTEDGQYSSS QCMLTERGRW NHYHGGDFVV RESRSSSTKI KFSMTQIDCT HTKGGLSLDS VIVYPSSCKD RF
101: DHGTKKVWID KRSGGVCLSI SAKGLSITGI DDRRYWSHIP TDESRFASVA YLQQTWWFEV DGEIDFPFPV GTYSIFFRLQ LGQSGKWFGR RVCNTEQVHG
201: WDIKPVRFQL WTEDGQYSSS QCMLTERGRW NHYHGGDFVV RESRSSSTKI KFSMTQIDCT HTKGGLSLDS VIVYPSSCKD RF
001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
Arabidopsis Description
AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.