Factsheet for TraesCS5D01G319500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G313700.1	Wheat	cytosol	98.61	98.26
TraesCS5A01G312700.1	Wheat	cytosol	97.91	97.91
HORVU5Hr1G080530.1	Barley	cytosol	97.56	97.56
Os09t0525300-01	Rice	cytosol	81.53	83.27
Zm00001d021224_P001	Maize	cytosol	80.84	78.38
EER99217	Sorghum	cytosol	80.84	77.59
GSMUA_Achr7P05860_001	Banana	cytosol	65.16	64.48
GSMUA_Achr3P12400_001	Banana	cytosol	63.41	63.19
Zm00001d024256_P001	Maize	cytosol, mitochondrion	52.26	60.24
CDY42484	Canola	cytosol	57.14	57.54
VIT_15s0048g01930.t01	Wine grape	cytosol	57.84	57.44
KRH03980	Soybean	cytosol, plastid	57.14	57.34
CDX89095	Canola	cytosol	57.14	57.34
Bra014456.1-P	Field mustard	cytosol	57.14	57.34
TraesCS2D01G397700.1	Wheat	cytosol	58.88	56.71
VIT_16s0100g00520.t01	Wine grape	cytosol	55.05	56.63
GSMUA_Achr11P...	Banana	cytosol	35.54	56.35
AT3G61060.2	Thale cress	cytosol	56.79	56.01
Zm00001d035636_P001	Maize	plastid	50.52	55.56
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	57.84	55.33
TraesCS6D01G237300.1	Wheat	cytosol	57.14	55.03
Solyc08g080360.2.1	Tomato	plastid	55.05	54.67
PGSC0003DMT400058590	Potato	plastid	54.7	54.33
Solyc10g017960.1.1	Tomato	cytosol	55.05	54.11
KRH65151	Soybean	cytosol	52.96	54.09
CDY57080	Canola	cytosol	52.96	53.9
KRH38594	Soybean	cytosol	54.01	53.63
KRH48244	Soybean	cytosol	52.26	53.38
Solyc12g056410.1.1	Tomato	cytosol, plastid	53.66	53.29
KRH09123	Soybean	cytosol	53.31	52.94
PGSC0003DMT400010881	Potato	plastid	53.31	52.94
CDY16361	Canola	extracellular	35.19	52.6
KRG91447	Soybean	cytosol, plastid	53.66	52.56
Bra019781.1-P	Field mustard	cytosol	52.26	52.26
KRH35368	Soybean	cytosol	54.01	52.01
CDX98047	Canola	cytosol	51.92	51.92
PGSC0003DMT400026564	Potato	cytosol	53.31	51.86
VIT_02s0025g04380.t01	Wine grape	cytosol	55.75	51.78
PGSC0003DMT400071397	Potato	cytosol	51.57	51.39
Solyc03g026160.2.1	Tomato	cytosol, extracellular	27.18	51.32
CDY38901	Canola	cytosol	49.48	51.08
Solyc01g091700.2.1	Tomato	cytosol	50.87	50.87
CDY32595	Canola	cytosol	50.52	50.17
TraesCS4D01G350000.1	Wheat	cytosol	53.66	50.16
AT5G52120.1	Thale cress	cytosol	50.52	49.83
Bra029137.1-P	Field mustard	cytosol	50.17	49.66
CDY63226	Canola	plastid	49.48	48.97
CDY49201	Canola	cytosol	49.48	48.97
Bra027618.1-P	Field mustard	cytosol	49.48	48.97
CDY47354	Canola	cytosol	49.48	48.97
Bra027000.1-P	Field mustard	cytosol	49.13	48.62
CDY45973	Canola	cytosol	49.13	48.62
AT1G63090.1	Thale cress	cytosol	48.78	48.44
KRH57251	Soybean	plastid	56.45	47.51
PGSC0003DMT400037131	Potato	cytosol	48.08	46.62
AT1G12710.2	Thale cress	cytosol	52.61	45.35
TraesCS4D01G262300.1	Wheat	cytosol	26.13	28.3
TraesCS7D01G518300.2	Wheat	cytosol	13.59	27.27
TraesCS7D01G058100.1	Wheat	cytosol	23.0	25.19
TraesCS6D01G369100.1	Wheat	cytosol	25.78	24.92
TraesCS6D01G369200.1	Wheat	cytosol	25.09	24.41
TraesCS7D01G300300.1	Wheat	cytosol	24.39	23.49
TraesCS6D01G366600.1	Wheat	cytosol	25.44	22.96
TraesCS7D01G351500.1	Wheat	cytosol	23.0	22.92
TraesCS6D01G368900.1	Wheat	cytosol	24.04	22.48
TraesCS6D01G369000.1	Wheat	cytosol	24.04	22.04
TraesCS3D01G079700.1	Wheat	cytosol	21.95	21.21
TraesCS7D01G519100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.3	20.78
TraesCS5D01G566000.2	Wheat	cytosol	22.3	20.58
TraesCS5D01G035000.1	Wheat	cytosol, mitochondrion	24.04	20.54
TraesCS6D01G368000.1	Wheat	cytosol	21.95	20.52
TraesCS7D01G518400.1	Wheat	cytosol	22.65	20.44
TraesCS3D01G083600.1	Wheat	cytosol	20.91	19.42
TraesCS6D01G367900.1	Wheat	cytosol	19.16	19.1
TraesCS6D01G043900.1	Wheat	cytosol	19.51	18.67
TraesCS6D01G368100.1	Wheat	cytosol	21.6	11.07

Protein Annotations

EnsemblPlants:TraesCS5D01G319500.1	EnsemblPlantsGene:TraesCS5D01G319500	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF9
PFAM:PF14299	PFscan:PS50181	SEG:seg	SUPFAM:SSF81383	MapMan:19.2.2.8.1.4.6	:

Description

No Description!

Coordinates

chr5D:+:412307879..412309752

Molecular Weight (calculated)

32017.3 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.308

Length

287 amino acids

Sequence
(BLAST)

001: MGAVGSSARR GGGTALGDLP ENCVAEVMLR LNPTEICGMA RLSRTFRGAA SGDAVWEAKL PRNYARLLAA AGGDEEAAAL EAEAIPKKEL YARLCRRNSL
101: DGGTKEFWLD KAGGGTCMTI YSRALSITGI DDRRYWNFIP NDESRFRSVA YLSQIWWFEV RGEVEFCFPE GTYSLFFRIH LGRPFKRLGR RVYSAEHIHG
201: WDVKPVRFQL STSDGQQAQS KCYLTDPGVW IYHHVGDFVV KDSNEPLNIQ FAMVQIDCTH TKGGLCMDSV VIKPKCLARK KGPGSYE

Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)

001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F

Arabidopsis Description

AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.