Factsheet for Bra027000.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003735.1-P
Bra008231.1-P
Bra015801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63090.1	Bra003735.1-P	AT1G75950.1	12795696
AT1G63090.1	Bra008231.1-P	AT1G75950.1	12795696
AT1G63090.1	Bra015801.1-P	AT1G75950.1	12795696

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63226	Canola	plastid	98.97	98.97
CDY45973	Canola	cytosol	97.93	97.93
CDY16361	Canola	extracellular	62.41	94.27
Bra027618.1-P	Field mustard	cytosol	90.0	90.0
AT1G63090.1	Thale cress	cytosol	81.03	81.31
Bra019781.1-P	Field mustard	cytosol	71.38	72.13
KRH03980	Soybean	cytosol, plastid	62.07	62.94
HORVU1Hr1G048690.1	Barley	peroxisome	36.55	62.35
PGSC0003DMT400058590	Potato	plastid	57.24	57.44
Solyc08g080360.2.1	Tomato	plastid	56.9	57.09
HORVU2Hr1G094960.4	Barley	cytosol	38.97	57.07
PGSC0003DMT400010881	Potato	plastid	55.86	56.06
Solyc12g056410.1.1	Tomato	cytosol, plastid	55.86	56.06
VIT_02s0025g04380.t01	Wine grape	cytosol	59.66	55.99
Bra014456.1-P	Field mustard	cytosol	54.48	55.24
GSMUA_Achr4P27200_001	Banana	cytosol	54.14	54.7
HORVU1Hr1G048700.4	Barley	cytosol, nucleus, plasma membrane	56.21	53.97
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	55.52	53.67
KRH57251	Soybean	plastid	63.1	53.67
GSMUA_Achr4P24870_001	Banana	cytosol	55.86	53.47
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	55.17	53.33
GSMUA_Achr11P...	Banana	cytosol	52.41	53.15
GSMUA_Achr1P03900_001	Banana	cytosol	53.1	52.74
Zm00001d029673_P001	Maize	plasma membrane	53.79	52.7
TraesCS1A01G188700.1	Wheat	plasma membrane	55.17	52.63
Os09t0525300-01	Rice	cytosol	50.69	52.31
Os03t0116700-01	Rice	cytosol, extracellular	53.45	52.19
EER94629	Sorghum	plasma membrane	54.14	52.16
GSMUA_Achr5P03300_001	Banana	cytosol	52.07	51.89
TraesCS2A01G400100.1	Wheat	cytosol	52.07	50.67
TraesCS2D01G397700.1	Wheat	cytosol	52.07	50.67
EER95641	Sorghum	cytosol	51.03	50.34
Zm00001d027361_P001	Maize	cytosol	51.72	50.34
GSMUA_Achr3P12400_001	Banana	cytosol	49.66	50.0
Zm00001d021224_P001	Maize	cytosol	51.03	50.0
EER99217	Sorghum	cytosol	51.38	49.83
TraesCS5A01G312700.1	Wheat	cytosol	49.31	49.83
GSMUA_Achr7P05860_001	Banana	cytosol	49.66	49.66
TraesCS5B01G313700.1	Wheat	cytosol	49.31	49.65
TraesCS2B01G418200.2	Wheat	cytosol	51.72	49.51
TraesCS4B01G356300.1	Wheat	cytosol	52.07	49.19
TraesCS5D01G319500.1	Wheat	cytosol	48.62	49.13
KXG31015	Sorghum	cytosol	50.69	48.84
Os02t0675800-01	Rice	cytosol	50.0	48.82
HORVU5Hr1G080530.1	Barley	cytosol	48.28	48.78
TraesCS5A01G525700.1	Wheat	cytosol	51.38	48.69
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	51.03	48.68
TraesCS4D01G350000.1	Wheat	cytosol	51.38	48.53
TraesCS6A01G256100.1	Wheat	cytosol	49.31	47.99
TraesCS6B01G269300.1	Wheat	cytosol	49.31	47.99
TraesCS6D01G237300.1	Wheat	cytosol	49.31	47.99
Zm00001d051447_P002	Maize	cytosol	48.62	47.64
EES11284	Sorghum	cytosol	50.69	46.96
Bra006966.1-P	Field mustard	cytosol	48.62	46.84
Bra029137.1-P	Field mustard	cytosol	46.55	46.55
GSMUA_Achr11P...	Banana	cytosol	28.62	45.86
Bra023077.1-P	Field mustard	cytosol	46.21	45.58
Zm00001d026078_P001	Maize	cytosol	43.45	43.6
Os10t0522400-01	Rice	cytosol	24.48	43.03
HORVU4Hr1G086110.1	Barley	cytosol	22.41	42.76
Zm00001d024256_P001	Maize	cytosol, mitochondrion	34.48	40.16
Zm00001d035636_P001	Maize	plastid	33.1	36.78
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	28.62	35.02
Zm00001d021854_P001	Maize	cytosol	10.34	34.09
HORVU2Hr1G049730.1	Barley	cytosol	19.31	32.94
HORVU5Hr1G055050.1	Barley	mitochondrion	18.97	32.35
Bra024822.1-P	Field mustard	cytosol	20.69	27.52
Bra030758.1-P	Field mustard	cytosol	24.14	25.74
Bra018579.1-P	Field mustard	cytosol	24.48	25.54
Bra024827.1-P	Field mustard	cytosol	26.9	24.84
Bra024823.1-P	Field mustard	cytosol	24.14	24.48
Bra026608.1-P	Field mustard	cytosol	23.45	24.46
Bra026604.1-P	Field mustard	cytosol	26.21	23.6
Bra035198.1-P	Field mustard	cytosol	20.69	23.44
Bra038174.1-P	Field mustard	cytosol	22.76	23.32
Bra026605.1-P	Field mustard	cytosol	20.34	22.61
Bra026603.1-P	Field mustard	cytosol	22.41	22.34
Bra024824.1-P	Field mustard	cytosol	25.17	21.66
Bra024825.1-P	Field mustard	cytosol	21.03	21.25
Bra026606.1-P	Field mustard	plasma membrane, vacuole	25.17	20.92
Bra026609.1-P	Field mustard	cytosol	23.45	20.36

Protein Annotations

EnsemblPlants:Bra027000.1	EnsemblPlants:Bra027000.1-P	EnsemblPlantsGene:Bra027000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF2
PFAM:PF00646	PFAM:PF14299	PFscan:PS50181	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000254249A
UniProt:M4EDZ0	MapMan:19.2.2.8.1.4.6	:	:	:	:

Description

AT1G63090 (E=2e-143) AtPP2-A11 | AtPP2-A11 (Phloem protein 2-A11); carbohydrate binding

Coordinates

chrA09:+:7454925..7455953

Molecular Weight (calculated)

33083.3 Da

IEP (calculated)

8.782

GRAVY (calculated)

-0.411

Length

290 amino acids

Sequence
(BLAST)

001: MGSGFSLFTN GSSSSPSRER DLLKPGLGDL PESCVALILE KLDPVEICRF SKLNRAFRSA SWADFVWESK LPHDYRSILE KILGGFPEKL RKRDIYNFLS
101: RVNSFDDGTK KAWVDKRTSD LCLCLSVKGL SVTGIDDRRY WNHIPSDESR FSSVAYLQHV WWFQVDGEIE FPFPAGTYSV FFRLHLGKPG KRFGWKVCNT
201: EQIHGWDIKP VQFQIWTEDG QHSSSQCKLT EPGTWSHYHA GDFVVGKAKS SSTKLKFSMT QIDCTHTKGG LCVDSVIVYP SSCKDRLRRF

Best Arabidopsis Sequence Match ( AT1G63090.1 )
(BLAST)

001: MGSGFSLFQK NLSSCYGDRD LLQPGLGDLP ESCVALILQN LDPVEICRFS KLNTAFHGAS WADFVWESKL PPDYKLILEK ILGSFPDNLR KRDIFTFLSR
101: VNSFDEGNKK AWVDKRTGGL CLCTSAKGLS ITGIDDRRYW SHIPSDDSRF ASVAYVQQIW WFQVDGEIDF PFPAGTYSVY FRLQLGKPGK RFGWKVVDTE
201: QVHGWNIKPV RFQLSTEDGQ HSSSQCMLTE AGNWSHYHAG DFVVGKSKSS STKIKFSMTQ IDCTHTKGGL CVDSVVVYPS SCKDRLMQI

Arabidopsis Description

PP2A11F-box protein PP2-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.