Factsheet for Bra026603.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09375	Canola	cytosol	99.31	98.97
CDY68805	Canola	cytosol	58.76	98.84
Bra024822.1-P	Field mustard	cytosol	44.33	59.17
Bra024823.1-P	Field mustard	cytosol	50.17	51.05
Bra026608.1-P	Field mustard	cytosol	48.11	50.36
Bra026605.1-P	Field mustard	cytosol	43.3	48.28
Bra026604.1-P	Field mustard	cytosol	51.2	46.27
Bra024825.1-P	Field mustard	cytosol	44.67	45.3
Bra024827.1-P	Field mustard	cytosol	47.08	43.63
VIT_00s0214g00130.t01	Wine grape	cytosol	40.21	42.24
Bra026609.1-P	Field mustard	cytosol	47.08	41.02
Bra026606.1-P	Field mustard	plasma membrane, vacuole	49.14	40.97
Bra024824.1-P	Field mustard	cytosol	47.08	40.65
VIT_00s0214g00150.t01	Wine grape	cytosol	40.21	38.24
VIT_00s0214g00060.t01	Wine grape	cytosol	37.46	37.98
KRG92586	Soybean	cytosol, plastid	39.18	37.62
Solyc04g050990.2.1	Tomato	cytosol	37.8	37.04
Solyc05g055870.2.1	Tomato	cytosol	38.83	36.69
PGSC0003DMT400031292	Potato	cytosol	37.11	36.36
PGSC0003DMT400060018	Potato	cytosol	38.83	36.1
KRH68844	Soybean	cytosol	38.49	35.33
Bra035198.1-P	Field mustard	cytosol	30.93	35.16
Bra030758.1-P	Field mustard	cytosol	31.27	33.46
Bra018579.1-P	Field mustard	cytosol	31.96	33.45
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	39.86	33.24
VIT_00s0214g00090.t01	Wine grape	cytosol	37.46	32.34
Bra038174.1-P	Field mustard	cytosol	31.27	32.16
Bra019781.1-P	Field mustard	cytosol	23.37	23.69
Bra029137.1-P	Field mustard	cytosol	23.02	23.1
Bra027000.1-P	Field mustard	cytosol	22.34	22.41
Bra006966.1-P	Field mustard	cytosol	22.68	21.93
Bra014456.1-P	Field mustard	cytosol	21.31	21.68
Bra027618.1-P	Field mustard	cytosol	21.31	21.38
Bra023077.1-P	Field mustard	cytosol	19.93	19.73

Protein Annotations

EnsemblPlants:Bra026603.1	EnsemblPlants:Bra026603.1-P	EnsemblPlantsGene:Bra026603	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0030246	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like
PANTHER:PTHR32278	PANTHER:PTHR32278:SF6	PFAM:PF00646	PFAM:PF14299	SEG:seg	SMART:SM00256
SUPFAM:SSF81383	UniParc:UPI00025468C4	UniProt:M4ECU3	MapMan:35.1	:	:

Description

AT2G02360 (E=3e-090) AtPP2-B10 | AtPP2-B10 (Phloem protein 2-B10); carbohydrate binding

Coordinates

chrA02:+:20585112..20586463

Molecular Weight (calculated)

33321.5 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.353

Length

291 amino acids

Sequence
(BLAST)

001: MSETHSVESS GEGGGEINVS DWSPFDTLTE DCISNIVSFT SPRDACVFTS VSKTFKSAVK SDIIWEKFLP LEYPSMIPPS LASSSKMEIY FYLCNDPVLI
101: EDGKKCVWLE NTSGKRCIML SAESLYIKWI NDTHCWDWIT SPGSRFERVA KVNDVCWFEI RGTINTHELS PRTHYSSYIV FKEGFTDLPI EARVGVVGKQ
201: ASKRFFCFDV STDGQFLKKG RRTWYFEKPK EREDGWREIE LGRFFNKGGL MNSDEFEMSA IATELRHWKS GFILQGIEIR PATIQRPRTV G

Best Arabidopsis Sequence Match ( AT2G02360.1 )
(BLAST)

001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL

Arabidopsis Description

PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.