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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17599 Canola cytosol 95.87 73.85
AT2G02360.1 Thale cress nucleus 68.35 54.78
Bra024823.1-P Field mustard cytosol 62.84 47.9
Bra026608.1-P Field mustard cytosol 58.26 45.68
Bra026603.1-P Field mustard cytosol 59.17 44.33
AT2G02340.1 Thale cress cytosol 61.01 43.61
AT2G02350.2 Thale cress cytosol, mitochondrion 58.26 43.2
Bra026604.1-P Field mustard cytosol 58.26 39.44
AT2G02320.1 Thale cress mitochondrion 55.5 39.41
Bra024825.1-P Field mustard cytosol 50.92 38.68
Bra026605.1-P Field mustard cytosol 45.41 37.93
Bra026606.1-P Field mustard plasma membrane, vacuole 58.26 36.39
VIT_00s0214g00130.t01 Wine grape cytosol 45.41 35.74
Bra024827.1-P Field mustard cytosol 50.92 35.35
Bra026609.1-P Field mustard cytosol 52.29 34.13
VIT_00s0214g00060.t01 Wine grape cytosol 43.58 33.1
Solyc04g050990.2.1 Tomato cytosol 44.95 33.0
Bra024824.1-P Field mustard cytosol 50.0 32.34
PGSC0003DMT400031292 Potato cytosol 44.04 32.32
KRG92586 Soybean cytosol, plastid 44.5 32.01
Solyc05g055870.2.1 Tomato cytosol 44.95 31.82
PGSC0003DMT400060018 Potato cytosol 45.41 31.63
Bra035198.1-P Field mustard cytosol 36.24 30.86
VIT_00s0214g00150.t01 Wine grape cytosol 42.66 30.39
KRH68844 Soybean cytosol 44.04 30.28
VIT_00s0214g00040.t01 Wine grape cytosol, plastid 48.17 30.09
VIT_00s0214g00090.t01 Wine grape cytosol 45.87 29.67
Bra018579.1-P Field mustard cytosol 36.24 28.42
Bra030758.1-P Field mustard cytosol 35.32 28.31
Bra038174.1-P Field mustard cytosol 35.78 27.56
Bra019781.1-P Field mustard cytosol 30.73 23.34
Bra029137.1-P Field mustard cytosol 29.36 22.07
Bra006966.1-P Field mustard cytosol 29.36 21.26
Bra014456.1-P Field mustard cytosol 27.52 20.98
Bra027000.1-P Field mustard cytosol 27.52 20.69
Bra027618.1-P Field mustard cytosol 26.61 20.0
Bra023077.1-P Field mustard cytosol 26.61 19.73
Protein Annotations
Gene3D:1.20.1280.50MapMan:35.1EnsemblPlantsGene:Bra024822EnsemblPlants:Bra024822.1EnsemblPlants:Bra024822.1-PInterPro:F-box-like_dom_sf
InterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001810UniProt:M4E7R6
PFAM:PF00646PFAM:PF14299InterPro:PP2-likePFscan:PS50181PANTHER:PTHR32278PANTHER:PTHR32278:SF6
SMART:SM00256SUPFAM:SSF81383UniParc:UPI000253F8D1:::
Description
AT2G02360 (E=1e-087) AtPP2-B10 | AtPP2-B10 (Phloem protein 2-B10); carbohydrate binding
Coordinates
chrA06:+:23635427..23636250
Molecular Weight (calculated)
24458.8 Da
IEP (calculated)
4.864
GRAVY (calculated)
-0.244
Length
218 amino acids
Sequence
(BLAST)
001: MAKNHGVESS GEGRGKIGSA SSPFDSFPED CISKIVSFTS PRDTCVAATV SKAFESAVNS DVAWEKFLPP EYESLVPRSR DFSSKKDMYF ALCDEPVLID
101: DGTKSFWLEK ASGKRCIMLS AMNISIIWGD TPQYWEWITI PEARFKRVAE LLNVCWFEIR GRVNTRVLSP RTRYSAYLVF KKADHCYGFD DVAIEAGVGV
201: VGHEASTRTI CFEMDDDD
Best Arabidopsis Sequence Match ( AT2G02360.1 )
(BLAST)
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Arabidopsis Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.