Factsheet for Bra030758.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31110	Canola	plastid	94.12	94.81
Bra018579.1-P	Field mustard	cytosol	81.25	79.5
AT1G09155.1	Thale cress	cytosol	80.88	76.12
Bra038174.1-P	Field mustard	cytosol	69.12	66.43
VIT_14s0060g02020.t01	Wine grape	cytosol	53.68	51.23
VIT_14s0060g02000.t01	Wine grape	cytosol	52.94	50.0
KRG96762	Soybean	cytosol	50.0	47.39
KRH33867	Soybean	cytosol	45.96	47.35
KRH68480	Soybean	cytosol	49.26	46.69
Solyc01g100000.2.1	Tomato	cytosol	44.12	44.28
PGSC0003DMT400063744	Potato	cytosol	44.49	42.91
Solyc01g100010.2.1	Tomato	cytosol	42.65	41.73
Bra035198.1-P	Field mustard	cytosol	34.19	36.33
Bra024822.1-P	Field mustard	cytosol	28.31	35.32
Bra024823.1-P	Field mustard	cytosol	35.66	33.92
Bra026608.1-P	Field mustard	cytosol	33.46	32.73
Bra024825.1-P	Field mustard	cytosol	34.19	32.4
Bra026603.1-P	Field mustard	cytosol	33.46	31.27
Bra026604.1-P	Field mustard	cytosol	36.4	30.75
Bra024827.1-P	Field mustard	cytosol	34.56	29.94
Bra026609.1-P	Field mustard	cytosol	36.4	29.64
Bra026605.1-P	Field mustard	cytosol	27.21	28.35
Bra024824.1-P	Field mustard	cytosol	33.46	27.0
Bra026606.1-P	Field mustard	plasma membrane, vacuole	34.56	26.93
Bra014456.1-P	Field mustard	cytosol	27.21	25.87
Bra019781.1-P	Field mustard	cytosol	27.21	25.78
Bra023077.1-P	Field mustard	cytosol	26.1	24.15
Bra027000.1-P	Field mustard	cytosol	25.74	24.14
Bra006966.1-P	Field mustard	cytosol	25.74	23.26
Bra027618.1-P	Field mustard	cytosol	24.63	23.1
Bra029137.1-P	Field mustard	cytosol	23.53	22.07

Protein Annotations

EnsemblPlants:Bra030758.1	EnsemblPlants:Bra030758.1-P	EnsemblPlantsGene:Bra030758	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF15	PFAM:PF14299	SEG:seg
SUPFAM:SSF81383	UniParc:UPI0002546997	UniProt:M4EPN8	MapMan:35.1	:	:

Description

AT1G09155 (E=1e-111) AtPP2-B15 | AtPP2-B15 (Phloem protein 2-B15); carbohydrate binding

Coordinates

chrA08:+:20470371..20471351

Molecular Weight (calculated)

30862.9 Da

IEP (calculated)

8.814

GRAVY (calculated)

-0.390

Length

272 amino acids

Sequence
(BLAST)

001: MKMLPEACVA NILSFTTPAD TFSSASISSV FRLAGDSDFV WEKFLPSGYR RLISTWTHGS FSSKKELYRC LCESVLIDNG RKIFKIDKLS GKITYVLSAR
101: ELSITWSDQR HYWSWSHRSD SRFSEAVQLI MTDWLEVTGK IQTGALSPNT SYGAYLIMKV RERAYGLDLV PAETWVKVGN GGKKIGTSYL SCLDDKKQLM
201: KRLFYGHRDQ RTAKNEPRVR GDGWMEIELG EFETGGEGEE HDKEVVMSLT EVKGYQLKGG IVIDGIEVRP KR

Best Arabidopsis Sequence Match ( AT1G09155.1 )
(BLAST)

001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN

Arabidopsis Description

PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.