Factsheet for Bra018579.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71953	Canola	cytosol	99.64	99.64
Bra030758.1-P	Field mustard	cytosol	79.5	81.25
AT1G09155.1	Thale cress	cytosol	79.86	76.82
Bra038174.1-P	Field mustard	cytosol	66.55	65.37
VIT_14s0060g02020.t01	Wine grape	cytosol	52.16	50.88
VIT_14s0060g02000.t01	Wine grape	cytosol	50.36	48.61
KRH33867	Soybean	cytosol	45.68	48.11
Solyc01g100000.2.1	Tomato	cytosol	45.32	46.49
KRH68480	Soybean	cytosol	47.84	46.34
KRG96762	Soybean	cytosol	47.48	45.99
PGSC0003DMT400063744	Potato	cytosol	44.96	44.33
Solyc01g100010.2.1	Tomato	cytosol	43.53	43.53
Bra035198.1-P	Field mustard	cytosol	34.17	37.11
Bra024822.1-P	Field mustard	cytosol	28.42	36.24
Bra024823.1-P	Field mustard	cytosol	36.33	35.31
Bra026608.1-P	Field mustard	cytosol	34.53	34.53
Bra026604.1-P	Field mustard	cytosol	37.05	31.99
Bra026603.1-P	Field mustard	cytosol	33.45	31.96
Bra024825.1-P	Field mustard	cytosol	32.73	31.71
Bra024827.1-P	Field mustard	cytosol	35.25	31.21
Bra026609.1-P	Field mustard	cytosol	36.69	30.54
Bra026606.1-P	Field mustard	plasma membrane, vacuole	36.69	29.23
Bra024824.1-P	Field mustard	cytosol	34.89	28.78
Bra026605.1-P	Field mustard	cytosol	26.98	28.74
Bra014456.1-P	Field mustard	cytosol	26.26	25.52
Bra023077.1-P	Field mustard	cytosol	26.62	25.17
Bra019781.1-P	Field mustard	cytosol	25.9	25.09
Bra027000.1-P	Field mustard	cytosol	25.54	24.48
Bra006966.1-P	Field mustard	cytosol	25.9	23.92
Bra027618.1-P	Field mustard	cytosol	24.1	23.1
Bra029137.1-P	Field mustard	cytosol	23.74	22.76

Protein Annotations

EnsemblPlants:Bra018579.1	EnsemblPlants:Bra018579.1-P	EnsemblPlantsGene:Bra018579	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF15	PFAM:PF14299	SEG:seg
SUPFAM:SSF81383	UniParc:UPI000253E825	UniProt:M4DPY8	MapMan:35.1	:	:

Description

AT1G09155 (E=6e-086) AtPP2-B15 | AtPP2-B15 (Phloem protein 2-B15); carbohydrate binding

Coordinates

chrA06:-:3136949..3137965

Molecular Weight (calculated)

31652.8 Da

IEP (calculated)

5.524

GRAVY (calculated)

-0.326

Length

278 amino acids

Sequence
(BLAST)

001: MLTIEERIMM LPEACVANIL SFTTPADTFS SASVSSVFRV AGDSDFVWEK FLPSDYSRLI SSSTHQSFSS KKELFRCLCE SILIDNGRKI FKIEKLTGKI
101: SFVLSARELS ITWSDQRHYW SWSHRSDSRF SEGARLIMTD WLEIIGKIQT GALSPSTSYG AYLIMKVTER AYGLDLVPAE TWIKVGNGEN KTKTSYLSCL
201: DDKKQQMAKK EEIFGYYRRE PEMREDGWME IELGEFETGR EGNEEVVMSL TEVKGYQLKG GIVIDGIEVR PKSQKLSC

Best Arabidopsis Sequence Match ( AT1G09155.1 )
(BLAST)

001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN

Arabidopsis Description

PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.