Factsheet for Bra019781.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98047	Canola	cytosol	99.3	99.3
AT1G12710.2	Thale cress	cytosol	84.67	72.97
Bra027618.1-P	Field mustard	cytosol	73.52	72.76
Bra027000.1-P	Field mustard	cytosol	72.13	71.38
KRH03980	Soybean	cytosol, plastid	65.16	65.38
PGSC0003DMT400058590	Potato	plastid	63.41	62.98
Solyc08g080360.2.1	Tomato	plastid	63.07	62.63
HORVU1Hr1G048690.1	Barley	peroxisome	36.93	62.35
Solyc12g056410.1.1	Tomato	cytosol, plastid	61.32	60.9
PGSC0003DMT400010881	Potato	plastid	61.32	60.9
VIT_02s0025g04380.t01	Wine grape	cytosol	64.81	60.19
HORVU2Hr1G094960.4	Barley	cytosol	41.12	59.6
Bra014456.1-P	Field mustard	cytosol	56.1	56.29
GSMUA_Achr4P27200_001	Banana	cytosol	56.1	56.1
GSMUA_Achr1P03900_001	Banana	cytosol	56.45	55.48
KRH57251	Soybean	plastid	65.51	55.13
GSMUA_Achr4P24870_001	Banana	cytosol	57.84	54.79
GSMUA_Achr11P...	Banana	cytosol	54.36	54.55
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	56.79	54.33
GSMUA_Achr5P03300_001	Banana	cytosol	55.05	54.3
HORVU1Hr1G048700.4	Barley	cytosol, nucleus, plasma membrane	56.79	53.97
Zm00001d029673_P001	Maize	plasma membrane	55.4	53.72
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	56.1	53.67
Os09t0525300-01	Rice	cytosol	52.26	53.38
TraesCS1A01G188700.1	Wheat	plasma membrane	56.45	53.29
EER94629	Sorghum	plasma membrane	55.75	53.16
TraesCS2D01G397700.1	Wheat	cytosol	55.05	53.02
TraesCS2A01G400100.1	Wheat	cytosol	54.7	52.68
Os03t0116700-01	Rice	cytosol, extracellular	54.36	52.53
EER99217	Sorghum	cytosol	54.7	52.51
Zm00001d021224_P001	Maize	cytosol	54.01	52.36
TraesCS5D01G319500.1	Wheat	cytosol	52.26	52.26
TraesCS5B01G313700.1	Wheat	cytosol	52.26	52.08
Zm00001d027361_P001	Maize	cytosol	54.01	52.01
TraesCS5A01G312700.1	Wheat	cytosol	51.92	51.92
HORVU5Hr1G080530.1	Barley	cytosol	51.92	51.92
Os02t0675800-01	Rice	cytosol	53.66	51.85
GSMUA_Achr7P05860_001	Banana	cytosol	52.26	51.72
EER95641	Sorghum	cytosol	52.96	51.7
TraesCS2B01G418200.2	Wheat	cytosol	54.36	51.49
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	54.36	51.32
KXG31015	Sorghum	cytosol	53.66	51.16
GSMUA_Achr3P12400_001	Banana	cytosol	51.22	51.04
TraesCS6A01G256100.1	Wheat	cytosol	52.61	50.67
TraesCS6B01G269300.1	Wheat	cytosol	52.61	50.67
TraesCS6D01G237300.1	Wheat	cytosol	52.61	50.67
Bra006966.1-P	Field mustard	cytosol	52.96	50.5
GSMUA_Achr11P...	Banana	cytosol	31.36	49.72
Zm00001d051447_P002	Maize	cytosol	50.52	48.99
Bra029137.1-P	Field mustard	cytosol	49.48	48.97
TraesCS4B01G356300.1	Wheat	cytosol	52.26	48.86
Bra023077.1-P	Field mustard	cytosol	49.83	48.64
TraesCS5A01G525700.1	Wheat	cytosol	51.57	48.37
EES11284	Sorghum	cytosol	52.61	48.24
TraesCS4D01G350000.1	Wheat	cytosol	51.57	48.21
Os10t0522400-01	Rice	cytosol	26.83	46.67
HORVU4Hr1G086110.1	Barley	cytosol	23.0	43.42
Zm00001d026078_P001	Maize	cytosol	43.55	43.25
Zm00001d024256_P001	Maize	cytosol, mitochondrion	34.84	40.16
Zm00001d035636_P001	Maize	plastid	33.45	36.78
Zm00001d021854_P001	Maize	cytosol	11.15	36.36
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	29.62	35.87
HORVU2Hr1G049730.1	Barley	cytosol	19.86	33.53
HORVU5Hr1G055050.1	Barley	mitochondrion	19.86	33.53
Bra024822.1-P	Field mustard	cytosol	23.34	30.73
Bra030758.1-P	Field mustard	cytosol	25.78	27.21
Bra018579.1-P	Field mustard	cytosol	25.09	25.9
Bra038174.1-P	Field mustard	cytosol	25.44	25.8
Bra026608.1-P	Field mustard	cytosol	24.39	25.18
Bra024823.1-P	Field mustard	cytosol	24.04	24.13
Bra026604.1-P	Field mustard	cytosol	26.83	23.91
Bra024827.1-P	Field mustard	cytosol	26.13	23.89
Bra035198.1-P	Field mustard	cytosol	20.91	23.44
Bra026603.1-P	Field mustard	cytosol	23.69	23.37
Bra026605.1-P	Field mustard	cytosol	19.16	21.07
Bra024825.1-P	Field mustard	cytosol	20.56	20.56
Bra024824.1-P	Field mustard	cytosol	24.04	20.47
Bra026606.1-P	Field mustard	plasma membrane, vacuole	24.04	19.77
Bra026609.1-P	Field mustard	cytosol	23.0	19.76

Protein Annotations

EnsemblPlants:Bra019781.1	EnsemblPlants:Bra019781.1-P	EnsemblPlantsGene:Bra019781	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960
PANTHER:PTHR31960:SF2	PFAM:PF00646	PFAM:PF14299	PFscan:PS50181	SEG:seg	SMART:SM00256
SUPFAM:SSF81383	UniParc:UPI000253EC7A	UniProt:M4DTD8	MapMan:19.2.2.8.1.4.6	:	:

Description

AT1G12710 (E=5e-139) AtPP2-A12 | AtPP2-A12 (Phloem protein 2-A12); carbohydrate binding

Coordinates

chrA06:+:4435791..4436794

Molecular Weight (calculated)

32622.4 Da

IEP (calculated)

7.906

GRAVY (calculated)

-0.416

Length

287 amino acids

Sequence
(BLAST)

001: MGASHSALHK DLSSSSSSSS CLGDLPEDCV AQIVENLDPI EICRLSKLNR AFRGASWADF VWESKLPPNY EAFLERILGG FPENLQKRDI YACLCRVNSF
101: DQGTKKVWID KRSGGVCLSI SAKGLSITGI DDRRYWSHIP TDESRFASVA YLQQTWWFEV DGEIDFPFPA GTYSIFFRVQ LGQSGKWFGR RVCNTEQVHG
201: WDIKPVRFQL WTEDGQYSSS QCMLTERARW NHYHGGDFVV RESRRSSTKI KFSMTQIDCT HTKGGLSLDS VIVYPSSCKD RLNRSPV

Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)

001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F

Arabidopsis Description

AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.