CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027361_P001	Maize	cytosol	89.46	88.25
Os03t0116700-01	Rice	cytosol, extracellular	83.33	82.49
TraesCS5A01G525700.1	Wheat	cytosol	73.81	70.92
EER94629	Sorghum	plasma membrane	72.11	70.43
TraesCS4B01G356300.1	Wheat	cytosol	72.79	69.71
TraesCS4D01G350000.1	Wheat	cytosol	72.11	69.06
VIT_16s0100g00520.t01	Wine grape	cytosol	56.46	59.5
Solyc08g080360.2.1	Tomato	plastid	57.14	58.13
PGSC0003DMT400058590	Potato	plastid	57.14	58.13
VIT_15s0048g01930.t01	Wine grape	cytosol	55.78	56.75
KRH48244	Soybean	cytosol	54.08	56.58
Solyc03g026160.2.1	Tomato	cytosol, extracellular	29.25	56.58
PGSC0003DMT400010881	Potato	plastid	55.44	56.4
KRH65151	Soybean	cytosol	53.74	56.23
KXG31015	Sorghum	cytosol	57.48	56.15
AT3G61060.2	Thale cress	cytosol	55.44	56.01
VIT_02s0025g04380.t01	Wine grape	cytosol	58.84	55.99
EES11284	Sorghum	cytosol	59.52	55.91
CDY16361	Canola	extracellular	36.39	55.73
KRG91447	Soybean	cytosol, plastid	55.44	55.63
EER99217	Sorghum	cytosol	56.46	55.52
Solyc12g056410.1.1	Tomato	cytosol, plastid	54.42	55.36
Bra014456.1-P	Field mustard	cytosol	53.74	55.24
CDX89095	Canola	cytosol	53.74	55.24
CDY42484	Canola	cytosol	53.4	55.09
KRH03980	Soybean	cytosol, plastid	53.4	54.9
KRH35368	Soybean	cytosol	55.44	54.7
CDY57080	Canola	cytosol	52.04	54.26
Bra019781.1-P	Field mustard	cytosol	51.7	52.96
CDX98047	Canola	cytosol	51.36	52.61
KRH09123	Soybean	cytosol	51.7	52.6
KRH38594	Soybean	cytosol	50.68	51.56
AT1G63090.1	Thale cress	cytosol	50.68	51.56
CDY63226	Canola	plastid	50.68	51.38
CDY47354	Canola	cytosol	50.68	51.38
Bra027000.1-P	Field mustard	cytosol	50.34	51.03
Bra027618.1-P	Field mustard	cytosol	50.34	51.03
CDY45973	Canola	cytosol	50.34	51.03
CDY49201	Canola	cytosol	50.34	51.03
PGSC0003DMT400071397	Potato	cytosol	49.66	50.69
Solyc01g091700.2.1	Tomato	cytosol	49.32	50.52
PGSC0003DMT400037131	Potato	cytosol	50.34	50.0
Solyc10g017960.1.1	Tomato	cytosol	48.64	48.97
CDY38901	Canola	cytosol	46.26	48.92
PGSC0003DMT400026564	Potato	cytosol	48.3	48.14
CDY32595	Canola	cytosol	47.28	48.1
Bra029137.1-P	Field mustard	cytosol	46.6	47.24
AT5G52120.1	Thale cress	cytosol	46.26	46.74
KRH57251	Soybean	plastid	53.06	45.75
AT1G12710.2	Thale cress	cytosol	51.02	45.05
EES05996	Sorghum	cytosol	25.17	26.52
OQU85929	Sorghum	cytosol	24.49	25.26
EES05998	Sorghum	cytosol	23.81	25.18
KXG31332	Sorghum	cytosol	24.49	23.61
KXG31333	Sorghum	cytosol	24.15	23.36
KXG28410	Sorghum	cytosol	20.41	22.22
OQU85933	Sorghum	cytosol, mitochondrion	18.37	21.01
EES05994	Sorghum	cytosol	23.81	20.71
OQU92610	Sorghum	mitochondrion	22.45	17.69
OQU85932	Sorghum	mitochondrion	25.17	13.19

Protein Annotations

EnsemblPlants:EER95641	EnsemblPlantsGene:SORBI_3001G532000	EntrezGene:8077996	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF10
PFAM:PF14299	PFscan:PS50181	ProteinID:EER95641	ProteinID:EER95641.1	RefSeq:XP_002468643.1	SUPFAM:SSF81383
UniParc:UPI0001A83259	UniProt:C5X109	MapMan:19.2.2.8.1.4.6	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:79520156..79523376

Molecular Weight (calculated)

32493.8 Da

IEP (calculated)

7.994

GRAVY (calculated)

-0.194

Length

294 amino acids

Sequence
(BLAST)

001: MGAGASDLGG VEPGGKVARA GLGDLPELCA AEVLLRLGAP DICRLARLNR EFRGAAAADF VWEAKLPGNY GRLLRFVDDA EEGGSGRDWS AVGKKDVFAR
101: LAKPVPFDGG KREFWLEKSK GGICMALSSK ALVITGIDDR RYWINMPTTE SRFHSIAYLQ QIWWFEVVGE VDFCFPAGTY SLYFRLHLGK SSTRFGRRIC
201: SSEQVHGWDK KPVRLQFSTS DGQHAVSQCY LDEPGSWILY HVGDFVASSS EESIKLKFSL AQIDCTHTKG GLCVDSVLIY PKGFEPERVI KAQK

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.