CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05996	Sorghum	cytosol	23.35	46.95
OQU85929	Sorghum	cytosol	22.28	43.86
EES05998	Sorghum	cytosol	20.68	41.73
AT1G80110.1	Thale cress	cytosol	16.4	35.8
KXG31332	Sorghum	cytosol	19.43	35.74
KRH33867	Soybean	cytosol	16.58	35.23
KXG28410	Sorghum	cytosol	16.93	35.19
VIT_14s0060g02020.t01	Wine grape	cytosol	17.83	35.09
Bra035198.1-P	Field mustard	cytosol	15.86	34.77
CDX87293	Canola	cytosol	15.86	34.77
VIT_14s0060g02000.t01	Wine grape	cytosol	17.83	34.72
CDY39994	Canola	cytosol	15.69	34.38
KXG31333	Sorghum	cytosol	18.54	34.21
OQU85933	Sorghum	cytosol, mitochondrion	15.51	33.85
GSMUA_Achr5P10170_001	Banana	cytosol	9.63	33.75
VIT_14s0060g01990.t01	Wine grape	cytosol	16.58	33.57
PGSC0003DMT400063740	Potato	cytosol	16.58	32.4
Solyc01g099990.2.1	Tomato	cytosol	16.4	31.72
KRG96762	Soybean	cytosol	16.22	31.71
KRH68481	Soybean	cytosol	8.91	31.65
PGSC0003DMT400063744	Potato	cytosol	15.86	31.56
KRH68480	Soybean	cytosol	16.04	31.36
Solyc01g100010.2.1	Tomato	cytosol	15.51	31.3
Solyc01g100000.2.1	Tomato	cytosol	14.44	29.89
EES05994	Sorghum	cytosol	17.29	28.7
EER94629	Sorghum	plasma membrane	13.55	25.25
EER95641	Sorghum	cytosol	13.19	25.17
EER99217	Sorghum	cytosol	12.48	23.41
OQU92610	Sorghum	mitochondrion	15.15	22.79
EES11284	Sorghum	cytosol	12.66	22.68
KXG31015	Sorghum	cytosol	11.41	21.26

Protein Annotations

EnsemblPlants:OQU85932	EnsemblPlantsGene:SORBI_3004G341000	EntrezGene:8056429	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF13
PFAM:PF14299	ProteinID:OQU85932	ProteinID:OQU85932.1	SEG:seg	UniParc:UPI000B8BACD3	UniProt:A0A1Z5RQ94
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:67247103..67250149

Molecular Weight (calculated)

63242.5 Da

IEP (calculated)

10.342

GRAVY (calculated)

-0.566

Length

561 amino acids

Sequence
(BLAST)

001: MRVARRPRPP RVLLYQLGSD DRVACQASYS SSPSSRPEYF FRSPPWNRAM GIPLGLQRVS ASSSRAFQKP WAELGSPHAN FNYKSMHSMH PARPRSHPNR
101: NRPKAEGTTR DHRWRRQWRH RAPPPAARAR SRDCRRTSCW RRSRAPGRWP PAAPPLSAKP STQRPTPTRS GPASCPTTSL RSLTRSSPHH RRPRRSCSCG
201: SPTAPSSSPT ASRFSEAVEL RHYRWLEIGA KIDSMMLSQH TTYAAYIVYK VEENRWHERF TSIFGASKFP KERHDGWMEG EMGGFHNDEG EDGEVSISFR
301: TLPYAKIGLV ALGIEIRPKG LLSTSIAGKR VAIWPAFRAP CHLPLLADGE VLQPLASMKA LFLRLLDGPV LLADGLTSSW LDKETGGICY MLSARKLSIA
401: WGDNPTYWHW IPITGFRFSE AAELQKAKWL EIRGNIDSKM LSQHTTYSAY IVYMISIDYY GLRALKTFVS LGGRNKSTGH VCLVDGYNYS EHWQVMREYL
501: PEDTHFPQDR GGGGMMEAEL GEFHISEGDN GEVSISLMDT FSSKCGLVVM GIEIRPKKQG V

Best Arabidopsis Sequence Match ( AT2G02360.1 )
(BLAST)

001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL

Arabidopsis Description

PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.