CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051447_P002	Maize	cytosol	92.03	93.58
TraesCS6B01G269300.1	Wheat	cytosol	80.07	80.87
TraesCS6A01G256100.1	Wheat	cytosol	79.73	80.54
TraesCS6D01G237300.1	Wheat	cytosol	79.73	80.54
Os02t0675800-01	Rice	cytosol	78.41	79.46
EES11284	Sorghum	cytosol	73.09	70.29
GSMUA_Achr1P03900_001	Banana	cytosol	62.13	64.04
GSMUA_Achr11P...	Banana	cytosol	59.47	62.59
GSMUA_Achr4P27200_001	Banana	cytosol	58.8	61.67
GSMUA_Achr5P03300_001	Banana	cytosol	58.47	60.48
GSMUA_Achr4P24870_001	Banana	cytosol	60.13	59.74
VIT_15s0048g01930.t01	Wine grape	cytosol	56.81	59.17
EER94629	Sorghum	plasma membrane	59.14	59.14
VIT_16s0100g00520.t01	Wine grape	cytosol	53.49	57.71
EER95641	Sorghum	cytosol	56.15	57.48
KRH65151	Soybean	cytosol	52.82	56.58
CDY42484	Canola	cytosol	53.49	56.49
Solyc08g080360.2.1	Tomato	plastid	54.15	56.4
PGSC0003DMT400058590	Potato	plastid	54.15	56.4
KRH48244	Soybean	cytosol	52.49	56.23
CDX89095	Canola	cytosol	53.16	55.94
KRH03980	Soybean	cytosol, plastid	52.82	55.59
Bra014456.1-P	Field mustard	cytosol	52.82	55.59
EER99217	Sorghum	cytosol	55.15	55.52
AT3G61060.2	Thale cress	cytosol	53.16	54.98
CDY57080	Canola	cytosol	51.16	54.61
VIT_02s0025g04380.t01	Wine grape	cytosol	55.81	54.37
Solyc01g091700.2.1	Tomato	cytosol	51.83	54.36
PGSC0003DMT400010881	Potato	plastid	52.16	54.33
Solyc12g056410.1.1	Tomato	cytosol, plastid	52.16	54.33
PGSC0003DMT400071397	Potato	cytosol	51.83	54.17
Solyc03g026160.2.1	Tomato	cytosol, extracellular	27.24	53.95
Bra019781.1-P	Field mustard	cytosol	51.16	53.66
KRG91447	Soybean	cytosol, plastid	52.16	53.58
CDX98047	Canola	cytosol	50.83	53.31
CDY16361	Canola	extracellular	33.89	53.12
Solyc10g017960.1.1	Tomato	cytosol	51.49	53.08
KRH35368	Soybean	cytosol	52.49	53.02
PGSC0003DMT400026564	Potato	cytosol	51.49	52.54
KRH38594	Soybean	cytosol	49.17	51.21
CDY38901	Canola	cytosol	47.18	51.08
Bra027618.1-P	Field mustard	cytosol	49.17	51.03
CDY47354	Canola	cytosol	49.17	51.03
CDY49201	Canola	cytosol	49.17	51.03
AT1G63090.1	Thale cress	cytosol	48.84	50.87
KRH09123	Soybean	cytosol	48.84	50.87
AT5G52120.1	Thale cress	cytosol	49.17	50.86
Bra027000.1-P	Field mustard	cytosol	48.84	50.69
CDY63226	Canola	plastid	48.84	50.69
CDY45973	Canola	cytosol	48.84	50.69
PGSC0003DMT400037131	Potato	cytosol	48.84	49.66
CDY32595	Canola	cytosol	47.51	49.48
Bra029137.1-P	Field mustard	cytosol	47.51	49.31
KRH57251	Soybean	plastid	52.49	46.33
AT1G12710.2	Thale cress	cytosol	50.83	45.95
EES05996	Sorghum	cytosol	21.93	23.66
EES05998	Sorghum	cytosol	21.26	23.02
KXG31332	Sorghum	cytosol	22.26	21.97
KXG28410	Sorghum	cytosol	19.27	21.48
KXG31333	Sorghum	cytosol	21.59	21.38
OQU85929	Sorghum	cytosol	19.6	20.7
EES05994	Sorghum	cytosol	21.59	19.23
OQU85933	Sorghum	cytosol, mitochondrion	15.61	18.29
OQU92610	Sorghum	mitochondrion	20.27	16.35
OQU85932	Sorghum	mitochondrion	21.26	11.41

Protein Annotations

MapMan:19.2.2.8.1.4.6	UniProt:A0A194YT57	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001810	EnsemblPlants:KXG31015	ProteinID:KXG31015	ProteinID:KXG31015.1	PFAM:PF14299
InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR31960	PANTHER:PTHR31960:SF8	EnsemblPlantsGene:SORBI_3004G283700	SUPFAM:SSF81383
UniParc:UPI0007F28A00	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:62578040..62582171

Molecular Weight (calculated)

33560.8 Da

IEP (calculated)

6.343

GRAVY (calculated)

-0.249

Length

301 amino acids

Sequence
(BLAST)

001: MGAAGSSILG ADGEWGETSL GDMPESCVAA VLLYLDPPEI CQVARLNRAF RGAASADCVW AAKLPANYRY LAALAAAADD EGRGDGDANG KRFSLAARKK
101: EIYARLCRST LFDAGTKEFW ILKDKGGLCI SISSKAMTIT GIDDRRYWSH LATEESRFHS VAYLQQIWWL EVDGELEFCF PAGAYSLFFH LHLGRPYRRM
201: GRRLCGTEHV HGWDVTPTRF QLTTSDEQQA TSEYYLHLHE QGGWKLYHVG DFVVSDSDEP IKLKFSMMQI DCTHTKGGLC VDSVFIYPKG YKPEKASIVD
301: T

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.